RNA–Protein interactions for RNA: ENST00000604749.1

AC008555.5-202, humanhuman

TSL 4 BASIC

Gene AC008555.5, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.5-202ENST00000604749 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
AC008555.5-202ENST00000604749 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
AC008555.5-202ENST00000604749 ABCC9O60706 1549 aa22.62■■□□□ 1.21
AC008555.5-202ENST00000604749 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
AC008555.5-202ENST00000604749 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
AC008555.5-202ENST00000604749 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
AC008555.5-202ENST00000604749 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
AC008555.5-202ENST00000604749 NACADO15069 1562 aa22.16■■□□□ 1.14
AC008555.5-202ENST00000604749 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
AC008555.5-202ENST00000604749 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
AC008555.5-202ENST00000604749 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
AC008555.5-202ENST00000604749 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
AC008555.5-202ENST00000604749 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
AC008555.5-202ENST00000604749 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
AC008555.5-202ENST00000604749 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
AC008555.5-202ENST00000604749 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
AC008555.5-202ENST00000604749 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
AC008555.5-202ENST00000604749 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
AC008555.5-202ENST00000604749 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
AC008555.5-202ENST00000604749 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
AC008555.5-202ENST00000604749 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
AC008555.5-202ENST00000604749 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
AC008555.5-202ENST00000604749 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
AC008555.5-202ENST00000604749 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
AC008555.5-202ENST00000604749 WIZO95785 1651 aa20.51■□□□□ 0.87
AC008555.5-202ENST00000604749 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
AC008555.5-202ENST00000604749 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
AC008555.5-202ENST00000604749 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
AC008555.5-202ENST00000604749 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
AC008555.5-202ENST00000604749 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
AC008555.5-202ENST00000604749 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
AC008555.5-202ENST00000604749 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
AC008555.5-202ENST00000604749 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
AC008555.5-202ENST00000604749 CFTRP13569 1480 aa19.89■□□□□ 0.77
AC008555.5-202ENST00000604749 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
AC008555.5-202ENST00000604749 NESP48681 1621 aa19.73■□□□□ 0.75
AC008555.5-202ENST00000604749 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
AC008555.5-202ENST00000604749 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
AC008555.5-202ENST00000604749 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
AC008555.5-202ENST00000604749 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
AC008555.5-202ENST00000604749 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
AC008555.5-202ENST00000604749 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
AC008555.5-202ENST00000604749 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
AC008555.5-202ENST00000604749 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
AC008555.5-202ENST00000604749 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
AC008555.5-202ENST00000604749 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
AC008555.5-202ENST00000604749 CUX1P39880 1505 aa19.43■□□□□ 0.7
AC008555.5-202ENST00000604749 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
AC008555.5-202ENST00000604749 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
AC008555.5-202ENST00000604749 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
AC008555.5-202ENST00000604749 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
AC008555.5-202ENST00000604749 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
AC008555.5-202ENST00000604749 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
AC008555.5-202ENST00000604749 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
AC008555.5-202ENST00000604749 WDR62O43379 1518 aa19.3■□□□□ 0.68
AC008555.5-202ENST00000604749 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
AC008555.5-202ENST00000604749 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
AC008555.5-202ENST00000604749 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
AC008555.5-202ENST00000604749 SOGA1O94964 1423 aa19.24■□□□□ 0.67
AC008555.5-202ENST00000604749 EEA1Q15075 1411 aa19.17■□□□□ 0.66
AC008555.5-202ENST00000604749 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
AC008555.5-202ENST00000604749 CUX2O14529 1486 aa19.16■□□□□ 0.66
AC008555.5-202ENST00000604749 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
AC008555.5-202ENST00000604749 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
AC008555.5-202ENST00000604749 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
AC008555.5-202ENST00000604749 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
AC008555.5-202ENST00000604749 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.64
AC008555.5-202ENST00000604749 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
AC008555.5-202ENST00000604749 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
AC008555.5-202ENST00000604749 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
AC008555.5-202ENST00000604749 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
AC008555.5-202ENST00000604749 IGF1RP08069 1367 aa19■□□□□ 0.63
AC008555.5-202ENST00000604749 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
AC008555.5-202ENST00000604749 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.63
AC008555.5-202ENST00000604749 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
AC008555.5-202ENST00000604749 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
AC008555.5-202ENST00000604749 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
AC008555.5-202ENST00000604749 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
AC008555.5-202ENST00000604749 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
AC008555.5-202ENST00000604749 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
AC008555.5-202ENST00000604749 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
AC008555.5-202ENST00000604749 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
AC008555.5-202ENST00000604749 KIF21BO75037 1637 aa18.84■□□□□ 0.61
AC008555.5-202ENST00000604749 CUL7Q14999 1698 aa18.83■□□□□ 0.61
AC008555.5-202ENST00000604749 RAPGEF2Q9Y4G8 1499 aa18.83■□□□□ 0.6
AC008555.5-202ENST00000604749 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
AC008555.5-202ENST00000604749 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
AC008555.5-202ENST00000604749 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
AC008555.5-202ENST00000604749 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
AC008555.5-202ENST00000604749 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
AC008555.5-202ENST00000604749 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
AC008555.5-202ENST00000604749 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
AC008555.5-202ENST00000604749 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
AC008555.5-202ENST00000604749 TNIKQ9UKE5 1360 aa18.73■□□□□ 0.59
AC008555.5-202ENST00000604749 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
AC008555.5-202ENST00000604749 SYNJ2O15056 1496 aa18.72■□□□□ 0.59
AC008555.5-202ENST00000604749 FBLN2P98095 1184 aa18.67■□□□□ 0.58
AC008555.5-202ENST00000604749 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
AC008555.5-202ENST00000604749 NUP160Q12769 1436 aa18.57■□□□□ 0.56
AC008555.5-202ENST00000604749 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms