RNA–Protein interactions for RNA: ENST00000604017.1

AC012464.3-201, humanhuman

BASIC

Gene AC012464.3, Length 2,773 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012464.3-201ENST00000604017 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
AC012464.3-201ENST00000604017 HRCP23327 699 aa16.88■□□□□ 0.29
AC012464.3-201ENST00000604017 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
AC012464.3-201ENST00000604017 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
AC012464.3-201ENST00000604017 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
AC012464.3-201ENST00000604017 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
AC012464.3-201ENST00000604017 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
AC012464.3-201ENST00000604017 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
AC012464.3-201ENST00000604017 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
AC012464.3-201ENST00000604017 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
AC012464.3-201ENST00000604017 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
AC012464.3-201ENST00000604017 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
AC012464.3-201ENST00000604017 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
AC012464.3-201ENST00000604017 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
AC012464.3-201ENST00000604017 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
AC012464.3-201ENST00000604017 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
AC012464.3-201ENST00000604017 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
AC012464.3-201ENST00000604017 NEUROD1Q13562 356 aa15.58■□□□□ 0.09
AC012464.3-201ENST00000604017 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
AC012464.3-201ENST00000604017 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
AC012464.3-201ENST00000604017 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
AC012464.3-201ENST00000604017 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
AC012464.3-201ENST00000604017 MYT1Q01538 1121 aa15.41■□□□□ 0.06
AC012464.3-201ENST00000604017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
AC012464.3-201ENST00000604017 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
AC012464.3-201ENST00000604017 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
AC012464.3-201ENST00000604017 CENPBP07199 599 aaPredicted RBP15.28■□□□□ 0.04
AC012464.3-201ENST00000604017 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
AC012464.3-201ENST00000604017 ABCC9O60706 1549 aa15.25■□□□□ 0.03
AC012464.3-201ENST00000604017 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
AC012464.3-201ENST00000604017 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
AC012464.3-201ENST00000604017 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
AC012464.3-201ENST00000604017 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
AC012464.3-201ENST00000604017 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
AC012464.3-201ENST00000604017 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
AC012464.3-201ENST00000604017 MIER1Q8N108 512 aa14.96□□□□□ -0.01
AC012464.3-201ENST00000604017 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
AC012464.3-201ENST00000604017 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
AC012464.3-201ENST00000604017 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
AC012464.3-201ENST00000604017 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
AC012464.3-201ENST00000604017 WIZO95785 1651 aa14.76□□□□□ -0.05
AC012464.3-201ENST00000604017 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
AC012464.3-201ENST00000604017 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
AC012464.3-201ENST00000604017 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
AC012464.3-201ENST00000604017 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
AC012464.3-201ENST00000604017 CCDC88BA6NC98 1476 aa14.67□□□□□ -0.06
AC012464.3-201ENST00000604017 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
AC012464.3-201ENST00000604017 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
AC012464.3-201ENST00000604017 ANP32EQ9BTT0 268 aa14.65□□□□□ -0.06
AC012464.3-201ENST00000604017 SOGA1O94964 1423 aa14.63□□□□□ -0.07
AC012464.3-201ENST00000604017 TNIKQ9UKE5 1360 aa14.61□□□□□ -0.07
AC012464.3-201ENST00000604017 RUSC2Q8N2Y8 1516 aa14.58□□□□□ -0.08
AC012464.3-201ENST00000604017 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
AC012464.3-201ENST00000604017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
AC012464.3-201ENST00000604017 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
AC012464.3-201ENST00000604017 NACADO15069 1562 aa14.5□□□□□ -0.09
AC012464.3-201ENST00000604017 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
AC012464.3-201ENST00000604017 BCANQ96GW7 911 aa14.46□□□□□ -0.09
AC012464.3-201ENST00000604017 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
AC012464.3-201ENST00000604017 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
AC012464.3-201ENST00000604017 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
AC012464.3-201ENST00000604017 EEA1Q15075 1411 aa14.38□□□□□ -0.11
AC012464.3-201ENST00000604017 TOP2AP11388 1531 aaKnown RBP14.37□□□□□ -0.11
AC012464.3-201ENST00000604017 DHX57Q6P158 1386 aaKnown RBP14.37□□□□□ -0.11
AC012464.3-201ENST00000604017 CLIP1P30622 1438 aa14.35□□□□□ -0.11
AC012464.3-201ENST00000604017 RANGAP1P46060 587 aaPredicted RBP14.33□□□□□ -0.12
AC012464.3-201ENST00000604017 FKBP8Q14318 412 aa14.33□□□□□ -0.12
AC012464.3-201ENST00000604017 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
AC012464.3-201ENST00000604017 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
AC012464.3-201ENST00000604017 APLP2Q06481 763 aa14.27□□□□□ -0.12
AC012464.3-201ENST00000604017 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.13
AC012464.3-201ENST00000604017 KIF21BO75037 1637 aa14.25□□□□□ -0.13
AC012464.3-201ENST00000604017 ITGAEP38570 1179 aa14.25□□□□□ -0.13
AC012464.3-201ENST00000604017 MSH5O43196 834 aa14.24□□□□□ -0.13
AC012464.3-201ENST00000604017 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
AC012464.3-201ENST00000604017 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
AC012464.3-201ENST00000604017 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
AC012464.3-201ENST00000604017 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
AC012464.3-201ENST00000604017 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
AC012464.3-201ENST00000604017 BAZ1BQ9UIG0 1483 aaKnown RBP14.13□□□□□ -0.15
AC012464.3-201ENST00000604017 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
AC012464.3-201ENST00000604017 NEFLP07196 543 aa14.11□□□□□ -0.15
AC012464.3-201ENST00000604017 ARAP1Q96P48 1450 aa14.08□□□□□ -0.16
AC012464.3-201ENST00000604017 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
AC012464.3-201ENST00000604017 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
AC012464.3-201ENST00000604017 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
AC012464.3-201ENST00000604017 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
AC012464.3-201ENST00000604017 CUX2O14529 1486 aa14.05□□□□□ -0.16
AC012464.3-201ENST00000604017 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
AC012464.3-201ENST00000604017 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
AC012464.3-201ENST00000604017 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
AC012464.3-201ENST00000604017 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
AC012464.3-201ENST00000604017 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
AC012464.3-201ENST00000604017 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
AC012464.3-201ENST00000604017 FANCIQ9NVI1 1328 aa13.99□□□□□ -0.17
AC012464.3-201ENST00000604017 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
AC012464.3-201ENST00000604017 ERICH6Q7L0X2 663 aa13.97□□□□□ -0.17
AC012464.3-201ENST00000604017 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
AC012464.3-201ENST00000604017 ANP32CO43423 234 aa13.92□□□□□ -0.18
AC012464.3-201ENST00000604017 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms