RNA–Protein interactions for RNA: ENST00000603971.1

AC011416.3-201, humanhuman

BASIC

Gene AC011416.3, Length 355 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011416.3-201ENST00000603971 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
AC011416.3-201ENST00000603971 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
AC011416.3-201ENST00000603971 ABCC9O60706 1549 aa18.64■□□□□ 0.58
AC011416.3-201ENST00000603971 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
AC011416.3-201ENST00000603971 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.51
AC011416.3-201ENST00000603971 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
AC011416.3-201ENST00000603971 NACADO15069 1562 aa18.22■□□□□ 0.51
AC011416.3-201ENST00000603971 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
AC011416.3-201ENST00000603971 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
AC011416.3-201ENST00000603971 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
AC011416.3-201ENST00000603971 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
AC011416.3-201ENST00000603971 SCRIBQ14160 1630 aa17.58■□□□□ 0.41
AC011416.3-201ENST00000603971 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
AC011416.3-201ENST00000603971 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
AC011416.3-201ENST00000603971 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
AC011416.3-201ENST00000603971 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
AC011416.3-201ENST00000603971 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
AC011416.3-201ENST00000603971 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
AC011416.3-201ENST00000603971 CC2D2AQ9P2K1 1620 aa16.95■□□□□ 0.3
AC011416.3-201ENST00000603971 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
AC011416.3-201ENST00000603971 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
AC011416.3-201ENST00000603971 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
AC011416.3-201ENST00000603971 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
AC011416.3-201ENST00000603971 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
AC011416.3-201ENST00000603971 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
AC011416.3-201ENST00000603971 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
AC011416.3-201ENST00000603971 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
AC011416.3-201ENST00000603971 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
AC011416.3-201ENST00000603971 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
AC011416.3-201ENST00000603971 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
AC011416.3-201ENST00000603971 WIZO95785 1651 aa16.6■□□□□ 0.25
AC011416.3-201ENST00000603971 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
AC011416.3-201ENST00000603971 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
AC011416.3-201ENST00000603971 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
AC011416.3-201ENST00000603971 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
AC011416.3-201ENST00000603971 CFTRP13569 1480 aa16.24■□□□□ 0.19
AC011416.3-201ENST00000603971 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
AC011416.3-201ENST00000603971 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
AC011416.3-201ENST00000603971 NESP48681 1621 aa16.18■□□□□ 0.18
AC011416.3-201ENST00000603971 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
AC011416.3-201ENST00000603971 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
AC011416.3-201ENST00000603971 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
AC011416.3-201ENST00000603971 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
AC011416.3-201ENST00000603971 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
AC011416.3-201ENST00000603971 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
AC011416.3-201ENST00000603971 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
AC011416.3-201ENST00000603971 CUX2O14529 1486 aa15.98■□□□□ 0.15
AC011416.3-201ENST00000603971 WDR62O43379 1518 aa15.96■□□□□ 0.15
AC011416.3-201ENST00000603971 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
AC011416.3-201ENST00000603971 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
AC011416.3-201ENST00000603971 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
AC011416.3-201ENST00000603971 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
AC011416.3-201ENST00000603971 CUX1P39880 1505 aa15.75■□□□□ 0.11
AC011416.3-201ENST00000603971 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
AC011416.3-201ENST00000603971 IFT140Q96RY7 1462 aa15.73■□□□□ 0.11
AC011416.3-201ENST00000603971 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
AC011416.3-201ENST00000603971 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
AC011416.3-201ENST00000603971 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.1
AC011416.3-201ENST00000603971 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
AC011416.3-201ENST00000603971 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
AC011416.3-201ENST00000603971 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
AC011416.3-201ENST00000603971 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
AC011416.3-201ENST00000603971 SOGA1O94964 1423 aa15.63■□□□□ 0.09
AC011416.3-201ENST00000603971 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
AC011416.3-201ENST00000603971 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
AC011416.3-201ENST00000603971 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
AC011416.3-201ENST00000603971 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
AC011416.3-201ENST00000603971 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
AC011416.3-201ENST00000603971 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
AC011416.3-201ENST00000603971 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.07
AC011416.3-201ENST00000603971 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
AC011416.3-201ENST00000603971 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
AC011416.3-201ENST00000603971 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
AC011416.3-201ENST00000603971 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
AC011416.3-201ENST00000603971 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
AC011416.3-201ENST00000603971 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
AC011416.3-201ENST00000603971 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
AC011416.3-201ENST00000603971 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
AC011416.3-201ENST00000603971 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
AC011416.3-201ENST00000603971 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.04
AC011416.3-201ENST00000603971 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
AC011416.3-201ENST00000603971 CUL7Q14999 1698 aa15.32■□□□□ 0.04
AC011416.3-201ENST00000603971 EEA1Q15075 1411 aa15.32■□□□□ 0.04
AC011416.3-201ENST00000603971 IGF1RP08069 1367 aa15.31■□□□□ 0.04
AC011416.3-201ENST00000603971 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
AC011416.3-201ENST00000603971 CHD1O14646 1710 aa15.29■□□□□ 0.04
AC011416.3-201ENST00000603971 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
AC011416.3-201ENST00000603971 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
AC011416.3-201ENST00000603971 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
AC011416.3-201ENST00000603971 CARMIL1Q5VZK9 1371 aa15.23■□□□□ 0.03
AC011416.3-201ENST00000603971 NUP160Q12769 1436 aa15.21■□□□□ 0.03
AC011416.3-201ENST00000603971 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
AC011416.3-201ENST00000603971 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
AC011416.3-201ENST00000603971 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
AC011416.3-201ENST00000603971 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
AC011416.3-201ENST00000603971 FBLN2P98095 1184 aa15.18■□□□□ 0.02
AC011416.3-201ENST00000603971 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
AC011416.3-201ENST00000603971 RAPGEF2Q9Y4G8 1499 aa15.17■□□□□ 0.02
AC011416.3-201ENST00000603971 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
AC011416.3-201ENST00000603971 CEP170Q5SW79 1584 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms