RNA–Protein interactions for RNA: ENST00000603718.1

AC008555.5-201, humanhuman

TSL 2 BASIC

Gene AC008555.5, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.5-201ENST00000603718 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
AC008555.5-201ENST00000603718 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
AC008555.5-201ENST00000603718 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
AC008555.5-201ENST00000603718 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
AC008555.5-201ENST00000603718 ABCC9O60706 1549 aa21.32■■□□□ 1
AC008555.5-201ENST00000603718 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
AC008555.5-201ENST00000603718 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
AC008555.5-201ENST00000603718 NACADO15069 1562 aa20.36■□□□□ 0.85
AC008555.5-201ENST00000603718 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
AC008555.5-201ENST00000603718 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
AC008555.5-201ENST00000603718 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
AC008555.5-201ENST00000603718 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
AC008555.5-201ENST00000603718 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
AC008555.5-201ENST00000603718 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
AC008555.5-201ENST00000603718 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
AC008555.5-201ENST00000603718 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
AC008555.5-201ENST00000603718 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
AC008555.5-201ENST00000603718 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
AC008555.5-201ENST00000603718 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
AC008555.5-201ENST00000603718 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
AC008555.5-201ENST00000603718 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
AC008555.5-201ENST00000603718 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
AC008555.5-201ENST00000603718 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
AC008555.5-201ENST00000603718 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
AC008555.5-201ENST00000603718 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
AC008555.5-201ENST00000603718 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
AC008555.5-201ENST00000603718 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
AC008555.5-201ENST00000603718 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
AC008555.5-201ENST00000603718 FOXD1Q16676 465 aa18.7■□□□□ 0.58
AC008555.5-201ENST00000603718 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
AC008555.5-201ENST00000603718 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
AC008555.5-201ENST00000603718 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
AC008555.5-201ENST00000603718 WIZO95785 1651 aa18.62■□□□□ 0.57
AC008555.5-201ENST00000603718 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
AC008555.5-201ENST00000603718 NESP48681 1621 aa18.42■□□□□ 0.54
AC008555.5-201ENST00000603718 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
AC008555.5-201ENST00000603718 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
AC008555.5-201ENST00000603718 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
AC008555.5-201ENST00000603718 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
AC008555.5-201ENST00000603718 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
AC008555.5-201ENST00000603718 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
AC008555.5-201ENST00000603718 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
AC008555.5-201ENST00000603718 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
AC008555.5-201ENST00000603718 CUX2O14529 1486 aa18.13■□□□□ 0.49
AC008555.5-201ENST00000603718 CFTRP13569 1480 aa18.09■□□□□ 0.49
AC008555.5-201ENST00000603718 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
AC008555.5-201ENST00000603718 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
AC008555.5-201ENST00000603718 FANCD2Q9BXW9 1451 aa18.06■□□□□ 0.48
AC008555.5-201ENST00000603718 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
AC008555.5-201ENST00000603718 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
AC008555.5-201ENST00000603718 WDR62O43379 1518 aa17.95■□□□□ 0.46
AC008555.5-201ENST00000603718 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
AC008555.5-201ENST00000603718 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
AC008555.5-201ENST00000603718 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
AC008555.5-201ENST00000603718 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
AC008555.5-201ENST00000603718 MSH5O43196 834 aa17.68■□□□□ 0.42
AC008555.5-201ENST00000603718 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
AC008555.5-201ENST00000603718 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
AC008555.5-201ENST00000603718 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
AC008555.5-201ENST00000603718 CUX1P39880 1505 aa17.62■□□□□ 0.41
AC008555.5-201ENST00000603718 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
AC008555.5-201ENST00000603718 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
AC008555.5-201ENST00000603718 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
AC008555.5-201ENST00000603718 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
AC008555.5-201ENST00000603718 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
AC008555.5-201ENST00000603718 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
AC008555.5-201ENST00000603718 SOGA1O94964 1423 aa17.53■□□□□ 0.4
AC008555.5-201ENST00000603718 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
AC008555.5-201ENST00000603718 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
AC008555.5-201ENST00000603718 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
AC008555.5-201ENST00000603718 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
AC008555.5-201ENST00000603718 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
AC008555.5-201ENST00000603718 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
AC008555.5-201ENST00000603718 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
AC008555.5-201ENST00000603718 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
AC008555.5-201ENST00000603718 CHD1O14646 1710 aa17.41■□□□□ 0.38
AC008555.5-201ENST00000603718 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
AC008555.5-201ENST00000603718 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
AC008555.5-201ENST00000603718 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
AC008555.5-201ENST00000603718 FBLN2P98095 1184 aa17.36■□□□□ 0.37
AC008555.5-201ENST00000603718 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
AC008555.5-201ENST00000603718 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
AC008555.5-201ENST00000603718 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
AC008555.5-201ENST00000603718 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
AC008555.5-201ENST00000603718 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
AC008555.5-201ENST00000603718 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
AC008555.5-201ENST00000603718 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
AC008555.5-201ENST00000603718 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
AC008555.5-201ENST00000603718 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
AC008555.5-201ENST00000603718 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
AC008555.5-201ENST00000603718 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
AC008555.5-201ENST00000603718 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
AC008555.5-201ENST00000603718 ADRA2BP18089 450 aa17.18■□□□□ 0.34
AC008555.5-201ENST00000603718 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
AC008555.5-201ENST00000603718 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
AC008555.5-201ENST00000603718 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
AC008555.5-201ENST00000603718 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
AC008555.5-201ENST00000603718 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
AC008555.5-201ENST00000603718 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
AC008555.5-201ENST00000603718 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms