RNA–Protein interactions for RNA: ENST00000603468.1

AC009549.1-201, humanhuman

BASIC

Gene AC009549.1, Length 1,686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009549.1-201ENST00000603468 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
AC009549.1-201ENST00000603468 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
AC009549.1-201ENST00000603468 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
AC009549.1-201ENST00000603468 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
AC009549.1-201ENST00000603468 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
AC009549.1-201ENST00000603468 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
AC009549.1-201ENST00000603468 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
AC009549.1-201ENST00000603468 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
AC009549.1-201ENST00000603468 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
AC009549.1-201ENST00000603468 ABCC9O60706 1549 aa21.56■■□□□ 1.04
AC009549.1-201ENST00000603468 HRCP23327 699 aa21.34■■□□□ 1.01
AC009549.1-201ENST00000603468 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
AC009549.1-201ENST00000603468 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
AC009549.1-201ENST00000603468 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
AC009549.1-201ENST00000603468 NACADO15069 1562 aa21.09■□□□□ 0.97
AC009549.1-201ENST00000603468 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
AC009549.1-201ENST00000603468 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
AC009549.1-201ENST00000603468 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
AC009549.1-201ENST00000603468 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
AC009549.1-201ENST00000603468 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
AC009549.1-201ENST00000603468 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
AC009549.1-201ENST00000603468 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
AC009549.1-201ENST00000603468 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
AC009549.1-201ENST00000603468 WIZO95785 1651 aa20.66■□□□□ 0.9
AC009549.1-201ENST00000603468 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
AC009549.1-201ENST00000603468 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
AC009549.1-201ENST00000603468 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
AC009549.1-201ENST00000603468 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
AC009549.1-201ENST00000603468 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
AC009549.1-201ENST00000603468 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
AC009549.1-201ENST00000603468 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
AC009549.1-201ENST00000603468 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
AC009549.1-201ENST00000603468 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
AC009549.1-201ENST00000603468 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
AC009549.1-201ENST00000603468 EEA1Q15075 1411 aa20.17■□□□□ 0.82
AC009549.1-201ENST00000603468 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
AC009549.1-201ENST00000603468 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
AC009549.1-201ENST00000603468 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
AC009549.1-201ENST00000603468 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
AC009549.1-201ENST00000603468 SOGA1O94964 1423 aa19.96■□□□□ 0.79
AC009549.1-201ENST00000603468 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
AC009549.1-201ENST00000603468 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
AC009549.1-201ENST00000603468 KIF21BO75037 1637 aa19.91■□□□□ 0.78
AC009549.1-201ENST00000603468 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
AC009549.1-201ENST00000603468 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
AC009549.1-201ENST00000603468 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
AC009549.1-201ENST00000603468 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
AC009549.1-201ENST00000603468 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
AC009549.1-201ENST00000603468 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
AC009549.1-201ENST00000603468 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.75
AC009549.1-201ENST00000603468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
AC009549.1-201ENST00000603468 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
AC009549.1-201ENST00000603468 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
AC009549.1-201ENST00000603468 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.74
AC009549.1-201ENST00000603468 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
AC009549.1-201ENST00000603468 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
AC009549.1-201ENST00000603468 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
AC009549.1-201ENST00000603468 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
AC009549.1-201ENST00000603468 CLIP1P30622 1438 aa19.61■□□□□ 0.73
AC009549.1-201ENST00000603468 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
AC009549.1-201ENST00000603468 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
AC009549.1-201ENST00000603468 RAPGEF2Q9Y4G8 1499 aa19.53■□□□□ 0.72
AC009549.1-201ENST00000603468 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
AC009549.1-201ENST00000603468 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
AC009549.1-201ENST00000603468 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
AC009549.1-201ENST00000603468 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
AC009549.1-201ENST00000603468 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
AC009549.1-201ENST00000603468 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
AC009549.1-201ENST00000603468 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
AC009549.1-201ENST00000603468 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
AC009549.1-201ENST00000603468 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
AC009549.1-201ENST00000603468 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
AC009549.1-201ENST00000603468 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
AC009549.1-201ENST00000603468 CUX1P39880 1505 aa19.35■□□□□ 0.69
AC009549.1-201ENST00000603468 CFTRP13569 1480 aa19.31■□□□□ 0.68
AC009549.1-201ENST00000603468 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
AC009549.1-201ENST00000603468 APLP2Q06481 763 aa19.28■□□□□ 0.68
AC009549.1-201ENST00000603468 KIF27Q86VH2 1401 aa19.27■□□□□ 0.67
AC009549.1-201ENST00000603468 RRBP1Q9P2E9 1410 aaKnown RBP19.23■□□□□ 0.67
AC009549.1-201ENST00000603468 CUX2O14529 1486 aa19.23■□□□□ 0.67
AC009549.1-201ENST00000603468 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
AC009549.1-201ENST00000603468 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
AC009549.1-201ENST00000603468 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
AC009549.1-201ENST00000603468 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
AC009549.1-201ENST00000603468 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
AC009549.1-201ENST00000603468 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
AC009549.1-201ENST00000603468 KANK4Q5T7N3 995 aaPredicted RBP19.03■□□□□ 0.64
AC009549.1-201ENST00000603468 MIER1Q8N108 512 aa19.03■□□□□ 0.64
AC009549.1-201ENST00000603468 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
AC009549.1-201ENST00000603468 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
AC009549.1-201ENST00000603468 IGF1RP08069 1367 aa18.99■□□□□ 0.63
AC009549.1-201ENST00000603468 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
AC009549.1-201ENST00000603468 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
AC009549.1-201ENST00000603468 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
AC009549.1-201ENST00000603468 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
AC009549.1-201ENST00000603468 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
AC009549.1-201ENST00000603468 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
AC009549.1-201ENST00000603468 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
AC009549.1-201ENST00000603468 EFCAB5A4FU69 1503 aa18.88■□□□□ 0.61
AC009549.1-201ENST00000603468 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms