RNA–Protein interactions for RNA: ENST00000603297.1

AC011247.3-201, humanhuman

BASIC

Gene AC011247.3, Length 438 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011247.3-201ENST00000603297 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
AC011247.3-201ENST00000603297 ABCC9O60706 1549 aa30.69■■■□□ 2.5
AC011247.3-201ENST00000603297 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
AC011247.3-201ENST00000603297 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
AC011247.3-201ENST00000603297 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
AC011247.3-201ENST00000603297 NACADO15069 1562 aa28.85■■■□□ 2.21
AC011247.3-201ENST00000603297 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
AC011247.3-201ENST00000603297 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
AC011247.3-201ENST00000603297 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
AC011247.3-201ENST00000603297 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
AC011247.3-201ENST00000603297 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
AC011247.3-201ENST00000603297 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
AC011247.3-201ENST00000603297 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
AC011247.3-201ENST00000603297 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
AC011247.3-201ENST00000603297 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
AC011247.3-201ENST00000603297 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
AC011247.3-201ENST00000603297 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
AC011247.3-201ENST00000603297 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
AC011247.3-201ENST00000603297 DNAJC5Q9H3Z4 198 aa26.72■■□□□ 1.87
AC011247.3-201ENST00000603297 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
AC011247.3-201ENST00000603297 ERCC6Q03468 1493 aa26.53■■□□□ 1.84
AC011247.3-201ENST00000603297 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
AC011247.3-201ENST00000603297 CUX2O14529 1486 aa26.49■■□□□ 1.83
AC011247.3-201ENST00000603297 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
AC011247.3-201ENST00000603297 SMARCA2P51531 1590 aa26.45■■□□□ 1.82
AC011247.3-201ENST00000603297 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
AC011247.3-201ENST00000603297 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
AC011247.3-201ENST00000603297 NESP48681 1621 aa26.3■■□□□ 1.8
AC011247.3-201ENST00000603297 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
AC011247.3-201ENST00000603297 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
AC011247.3-201ENST00000603297 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
AC011247.3-201ENST00000603297 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
AC011247.3-201ENST00000603297 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
AC011247.3-201ENST00000603297 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
AC011247.3-201ENST00000603297 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
AC011247.3-201ENST00000603297 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
AC011247.3-201ENST00000603297 WIZO95785 1651 aa25.8■■□□□ 1.72
AC011247.3-201ENST00000603297 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
AC011247.3-201ENST00000603297 WDR62O43379 1518 aa25.65■■□□□ 1.7
AC011247.3-201ENST00000603297 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
AC011247.3-201ENST00000603297 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
AC011247.3-201ENST00000603297 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
AC011247.3-201ENST00000603297 CFTRP13569 1480 aa25.47■■□□□ 1.67
AC011247.3-201ENST00000603297 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
AC011247.3-201ENST00000603297 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
AC011247.3-201ENST00000603297 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
AC011247.3-201ENST00000603297 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
AC011247.3-201ENST00000603297 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
AC011247.3-201ENST00000603297 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
AC011247.3-201ENST00000603297 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
AC011247.3-201ENST00000603297 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
AC011247.3-201ENST00000603297 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
AC011247.3-201ENST00000603297 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
AC011247.3-201ENST00000603297 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
AC011247.3-201ENST00000603297 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
AC011247.3-201ENST00000603297 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
AC011247.3-201ENST00000603297 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
AC011247.3-201ENST00000603297 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
AC011247.3-201ENST00000603297 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
AC011247.3-201ENST00000603297 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
AC011247.3-201ENST00000603297 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
AC011247.3-201ENST00000603297 CHD1O14646 1710 aa24.81■■□□□ 1.56
AC011247.3-201ENST00000603297 FBLN2P98095 1184 aa24.75■■□□□ 1.55
AC011247.3-201ENST00000603297 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
AC011247.3-201ENST00000603297 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
AC011247.3-201ENST00000603297 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
AC011247.3-201ENST00000603297 SOGA1O94964 1423 aa24.66■■□□□ 1.54
AC011247.3-201ENST00000603297 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
AC011247.3-201ENST00000603297 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
AC011247.3-201ENST00000603297 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
AC011247.3-201ENST00000603297 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
AC011247.3-201ENST00000603297 SNAPC4Q5SXM2 1469 aa24.55■■□□□ 1.52
AC011247.3-201ENST00000603297 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
AC011247.3-201ENST00000603297 CUX1P39880 1505 aa24.52■■□□□ 1.52
AC011247.3-201ENST00000603297 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
AC011247.3-201ENST00000603297 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
AC011247.3-201ENST00000603297 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
AC011247.3-201ENST00000603297 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
AC011247.3-201ENST00000603297 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
AC011247.3-201ENST00000603297 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
AC011247.3-201ENST00000603297 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
AC011247.3-201ENST00000603297 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
AC011247.3-201ENST00000603297 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
AC011247.3-201ENST00000603297 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
AC011247.3-201ENST00000603297 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
AC011247.3-201ENST00000603297 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
AC011247.3-201ENST00000603297 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
AC011247.3-201ENST00000603297 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
AC011247.3-201ENST00000603297 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
AC011247.3-201ENST00000603297 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
AC011247.3-201ENST00000603297 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
AC011247.3-201ENST00000603297 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
AC011247.3-201ENST00000603297 NUP160Q12769 1436 aa24.03■■□□□ 1.44
AC011247.3-201ENST00000603297 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
AC011247.3-201ENST00000603297 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
AC011247.3-201ENST00000603297 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
AC011247.3-201ENST00000603297 SHROOM2Q13796 1616 aa23.98■■□□□ 1.43
AC011247.3-201ENST00000603297 PRG4Q92954 1404 aaPredicted RBP23.86■■□□□ 1.41
AC011247.3-201ENST00000603297 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
AC011247.3-201ENST00000603297 KIF13AQ9H1H9 1805 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms