RNA–Protein interactions for RNA: ENST00000603187.5

ZSWIM8-214, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-214ENST00000603187 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
ZSWIM8-214ENST00000603187 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
ZSWIM8-214ENST00000603187 ABCC9O60706 1549 aa24.79■■□□□ 1.56
ZSWIM8-214ENST00000603187 CCDC180Q9P1Z9 1646 aa24.3■■□□□ 1.48
ZSWIM8-214ENST00000603187 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
ZSWIM8-214ENST00000603187 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■■■□ 24.5
ZSWIM8-214ENST00000603187 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
ZSWIM8-214ENST00000603187 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
ZSWIM8-214ENST00000603187 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
ZSWIM8-214ENST00000603187 NACADO15069 1562 aa23.07■■□□□ 1.28
ZSWIM8-214ENST00000603187 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
ZSWIM8-214ENST00000603187 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.2
ZSWIM8-214ENST00000603187 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.2
ZSWIM8-214ENST00000603187 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
ZSWIM8-214ENST00000603187 UNC13AQ9UPW8 1703 aa22.47■■□□□ 1.19
ZSWIM8-214ENST00000603187 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
ZSWIM8-214ENST00000603187 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
ZSWIM8-214ENST00000603187 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
ZSWIM8-214ENST00000603187 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
ZSWIM8-214ENST00000603187 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
ZSWIM8-214ENST00000603187 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
ZSWIM8-214ENST00000603187 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
ZSWIM8-214ENST00000603187 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
ZSWIM8-214ENST00000603187 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
ZSWIM8-214ENST00000603187 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
ZSWIM8-214ENST00000603187 WIZO95785 1651 aa21.66■■□□□ 1.06
ZSWIM8-214ENST00000603187 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
ZSWIM8-214ENST00000603187 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
ZSWIM8-214ENST00000603187 NESP48681 1621 aa21.4■■□□□ 1.02
ZSWIM8-214ENST00000603187 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
ZSWIM8-214ENST00000603187 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
ZSWIM8-214ENST00000603187 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
ZSWIM8-214ENST00000603187 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
ZSWIM8-214ENST00000603187 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
ZSWIM8-214ENST00000603187 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
ZSWIM8-214ENST00000603187 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
ZSWIM8-214ENST00000603187 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
ZSWIM8-214ENST00000603187 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
ZSWIM8-214ENST00000603187 FBLN2P98095 1184 aa20.97■□□□□ 0.95
ZSWIM8-214ENST00000603187 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
ZSWIM8-214ENST00000603187 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
ZSWIM8-214ENST00000603187 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
ZSWIM8-214ENST00000603187 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
ZSWIM8-214ENST00000603187 CFTRP13569 1480 aa20.82■□□□□ 0.92
ZSWIM8-214ENST00000603187 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
ZSWIM8-214ENST00000603187 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
ZSWIM8-214ENST00000603187 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
ZSWIM8-214ENST00000603187 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
ZSWIM8-214ENST00000603187 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
ZSWIM8-214ENST00000603187 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.893e-7■■■■□ 25.1
ZSWIM8-214ENST00000603187 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
ZSWIM8-214ENST00000603187 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
ZSWIM8-214ENST00000603187 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
ZSWIM8-214ENST00000603187 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
ZSWIM8-214ENST00000603187 SOGA1O94964 1423 aa20.55■□□□□ 0.88
ZSWIM8-214ENST00000603187 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.882e-7■■■■□ 21.2
ZSWIM8-214ENST00000603187 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
ZSWIM8-214ENST00000603187 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
ZSWIM8-214ENST00000603187 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
ZSWIM8-214ENST00000603187 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
ZSWIM8-214ENST00000603187 CUX1P39880 1505 aa20.44■□□□□ 0.86
ZSWIM8-214ENST00000603187 CUX2O14529 1486 aa20.42■□□□□ 0.86
ZSWIM8-214ENST00000603187 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
ZSWIM8-214ENST00000603187 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
ZSWIM8-214ENST00000603187 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
ZSWIM8-214ENST00000603187 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
ZSWIM8-214ENST00000603187 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
ZSWIM8-214ENST00000603187 WDR62O43379 1518 aa20.28■□□□□ 0.84
ZSWIM8-214ENST00000603187 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
ZSWIM8-214ENST00000603187 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
ZSWIM8-214ENST00000603187 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
ZSWIM8-214ENST00000603187 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
ZSWIM8-214ENST00000603187 ARID3CA6NKF2 412 aa20.24■□□□□ 0.83
ZSWIM8-214ENST00000603187 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
ZSWIM8-214ENST00000603187 IFT140Q96RY7 1462 aa20.23■□□□□ 0.83
ZSWIM8-214ENST00000603187 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
ZSWIM8-214ENST00000603187 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
ZSWIM8-214ENST00000603187 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
ZSWIM8-214ENST00000603187 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
ZSWIM8-214ENST00000603187 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
ZSWIM8-214ENST00000603187 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
ZSWIM8-214ENST00000603187 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
ZSWIM8-214ENST00000603187 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
ZSWIM8-214ENST00000603187 EIF4G3O43432 1585 aaKnown RBP20.05■□□□□ 0.8
ZSWIM8-214ENST00000603187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
ZSWIM8-214ENST00000603187 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
ZSWIM8-214ENST00000603187 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
ZSWIM8-214ENST00000603187 IGF1RP08069 1367 aa20.01■□□□□ 0.79
ZSWIM8-214ENST00000603187 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
ZSWIM8-214ENST00000603187 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
ZSWIM8-214ENST00000603187 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
ZSWIM8-214ENST00000603187 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
ZSWIM8-214ENST00000603187 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
ZSWIM8-214ENST00000603187 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
ZSWIM8-214ENST00000603187 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
ZSWIM8-214ENST00000603187 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
ZSWIM8-214ENST00000603187 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
ZSWIM8-214ENST00000603187 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
ZSWIM8-214ENST00000603187 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
ZSWIM8-214ENST00000603187 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms