RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 NISCHQ9Y2I1 1504 aa27.64■■■□□ 2.02
HCG18-246ENST00000602591 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
HCG18-246ENST00000602591 ABCC9O60706 1549 aa23.25■■□□□ 1.31
HCG18-246ENST00000602591 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
HCG18-246ENST00000602591 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
HCG18-246ENST00000602591 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
HCG18-246ENST00000602591 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
HCG18-246ENST00000602591 NACADO15069 1562 aa22.58■■□□□ 1.21
HCG18-246ENST00000602591 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
HCG18-246ENST00000602591 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
HCG18-246ENST00000602591 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
HCG18-246ENST00000602591 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
HCG18-246ENST00000602591 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
HCG18-246ENST00000602591 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
HCG18-246ENST00000602591 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
HCG18-246ENST00000602591 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
HCG18-246ENST00000602591 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
HCG18-246ENST00000602591 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
HCG18-246ENST00000602591 SMARCA4P51532 1647 aa21.32■■□□□ 1
HCG18-246ENST00000602591 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
HCG18-246ENST00000602591 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
HCG18-246ENST00000602591 WIZO95785 1651 aa21.22■□□□□ 0.99
HCG18-246ENST00000602591 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
HCG18-246ENST00000602591 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
HCG18-246ENST00000602591 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.95
HCG18-246ENST00000602591 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
HCG18-246ENST00000602591 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
HCG18-246ENST00000602591 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
HCG18-246ENST00000602591 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
HCG18-246ENST00000602591 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
HCG18-246ENST00000602591 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
HCG18-246ENST00000602591 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
HCG18-246ENST00000602591 NESP48681 1621 aa20.36■□□□□ 0.85
HCG18-246ENST00000602591 CFTRP13569 1480 aa20.35■□□□□ 0.85
HCG18-246ENST00000602591 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
HCG18-246ENST00000602591 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
HCG18-246ENST00000602591 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
HCG18-246ENST00000602591 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
HCG18-246ENST00000602591 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
HCG18-246ENST00000602591 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
HCG18-246ENST00000602591 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.81
HCG18-246ENST00000602591 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
HCG18-246ENST00000602591 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
HCG18-246ENST00000602591 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
HCG18-246ENST00000602591 CUX1P39880 1505 aa20.02■□□□□ 0.8
HCG18-246ENST00000602591 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
HCG18-246ENST00000602591 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
HCG18-246ENST00000602591 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
HCG18-246ENST00000602591 URB2Q14146 1524 aaKnown RBP19.94■□□□□ 0.78
HCG18-246ENST00000602591 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
HCG18-246ENST00000602591 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
HCG18-246ENST00000602591 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
HCG18-246ENST00000602591 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
HCG18-246ENST00000602591 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.76
HCG18-246ENST00000602591 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
HCG18-246ENST00000602591 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
HCG18-246ENST00000602591 SOGA1O94964 1423 aa19.79■□□□□ 0.76
HCG18-246ENST00000602591 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
HCG18-246ENST00000602591 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
HCG18-246ENST00000602591 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
HCG18-246ENST00000602591 WDR62O43379 1518 aa19.76■□□□□ 0.75
HCG18-246ENST00000602591 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
HCG18-246ENST00000602591 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
HCG18-246ENST00000602591 CUX2O14529 1486 aa19.69■□□□□ 0.74
HCG18-246ENST00000602591 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
HCG18-246ENST00000602591 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
HCG18-246ENST00000602591 ABCA10Q8WWZ4 1543 aa19.6■□□□□ 0.73
HCG18-246ENST00000602591 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
HCG18-246ENST00000602591 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
HCG18-246ENST00000602591 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
HCG18-246ENST00000602591 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
HCG18-246ENST00000602591 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
HCG18-246ENST00000602591 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
HCG18-246ENST00000602591 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
HCG18-246ENST00000602591 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
HCG18-246ENST00000602591 EEA1Q15075 1411 aa19.5■□□□□ 0.71
HCG18-246ENST00000602591 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
HCG18-246ENST00000602591 IGF1RP08069 1367 aa19.47■□□□□ 0.71
HCG18-246ENST00000602591 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
HCG18-246ENST00000602591 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
HCG18-246ENST00000602591 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
HCG18-246ENST00000602591 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
HCG18-246ENST00000602591 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
HCG18-246ENST00000602591 KIF21BO75037 1637 aa19.36■□□□□ 0.69
HCG18-246ENST00000602591 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
HCG18-246ENST00000602591 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
HCG18-246ENST00000602591 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
HCG18-246ENST00000602591 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
HCG18-246ENST00000602591 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
HCG18-246ENST00000602591 CUL7Q14999 1698 aa19.28■□□□□ 0.68
HCG18-246ENST00000602591 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
HCG18-246ENST00000602591 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
HCG18-246ENST00000602591 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
HCG18-246ENST00000602591 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
HCG18-246ENST00000602591 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
HCG18-246ENST00000602591 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
HCG18-246ENST00000602591 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
HCG18-246ENST00000602591 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
HCG18-246ENST00000602591 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
HCG18-246ENST00000602591 FBLN2P98095 1184 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms