RNA: ENST00000602252.5

RPS11-209, Transcript of ribosomal protein S11, humanhuman

TSL 2

Gene RPS11, Length 751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-209ENST00000602252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.03not detected■■■■■ 298.1
RPS11-209ENST00000602252 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.2not detected■■■■■ 82.5
RPS11-209ENST00000602252 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.01not detected■■■■■ 69
RPS11-209ENST00000602252 EFTUD2Q15029 972 aaKnown RBP eCLIP8.34□□□□□ -1.07not detected■■■■■ 63.6
RPS11-209ENST00000602252 AATFQ9NY61 560 aaKnown RBP eCLIP10.03□□□□□ -0.8not detected■■■■■ 44.5
RPS11-209ENST00000602252 NOLC1Q14978 699 aaKnown RBP eCLIP9.25□□□□□ -0.93not detected■■■■■ 34.5
RPS11-209ENST00000602252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.9not detected■■■■■ 30.7
RPS11-209ENST00000602252 SMNDC1O75940 238 aaKnown RBP eCLIP8.05□□□□□ -1.12not detected■■■■■ 29.5
RPS11-209ENST00000602252 SF3B4Q15427 424 aaKnown RBP eCLIP7.38□□□□□ -1.23not detected■■■■■ 28
RPS11-209ENST00000602252 SF3A3Q12874 501 aaKnown RBP eCLIP8.33□□□□□ -1.08not detected■■■■□ 25.7
RPS11-209ENST00000602252 IGF2BP3O00425 579 aaKnown RBP eCLIP10.34□□□□□ -0.75not detected■■■■□ 25.7
RPS11-209ENST00000602252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.08□□□□□ -1.12not detected■■■■□ 25.5
RPS11-209ENST00000602252 PRPF4O43172 522 aaKnown RBP eCLIP8.35□□□□□ -1.07not detected■■■■□ 24.6
RPS11-209ENST00000602252 DKC1O60832 514 aaKnown RBP eCLIP9.07□□□□□ -0.96not detected■■■■□ 22.8
RPS11-209ENST00000602252 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76not detected■■■■□ 20.7
RPS11-209ENST00000602252 PABPC4Q13310 644 aaKnown RBP eCLIP9.98□□□□□ -0.81not detected■■■■□ 19.9
RPS11-209ENST00000602252 AGGF1Q8N302 714 aaeCLIP8.25□□□□□ -1.09not detected■■■□□ 18.8
RPS11-209ENST00000602252 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.35not detected■■■□□ 18.3
RPS11-209ENST00000602252 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.02not detected■■■□□ 17.2
RPS11-209ENST00000602252 XRN2Q9H0D6 950 aaKnown RBP eCLIP10□□□□□ -0.81not detected■■■□□ 17.1
RPS11-209ENST00000602252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.21□□□□□ -1.26not detected■■■□□ 16.1
RPS11-209ENST00000602252 EIF3GO75821 320 aaKnown RBP eCLIP6.59□□□□□ -1.35not detected■■■□□ 15.9
RPS11-209ENST00000602252 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67not detected■■■□□ 15.7
RPS11-209ENST00000602252 PUM1Q14671 1186 aaKnown RBP eCLIP8.87□□□□□ -0.99not detected■■■□□ 15.6
RPS11-209ENST00000602252 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.01□□□□□ -1.13not detected■■■□□ 15
RPS11-209ENST00000602252 PCBP2Q15366 365 aaKnown RBP eCLIP7.87□□□□□ -1.15not detected■■■□□ 14.6
RPS11-209ENST00000602252 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.72□□□□□ -0.85not detected■■□□□ 14
RPS11-209ENST00000602252 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13not detected■■□□□ 13.2
RPS11-209ENST00000602252 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.7□□□□□ -0.86not detected■■□□□ 12.6
RPS11-209ENST00000602252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.01□□□□□ -0.97not detected■■□□□ 12.5
RPS11-209ENST00000602252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18not detected■■□□□ 12.1
RPS11-209ENST00000602252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91not detected■■□□□ 12
RPS11-209ENST00000602252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.71□□□□□ -1.18not detected■■□□□ 11.6
RPS11-209ENST00000602252 PTBP1P26599 531 aaKnown RBP eCLIP7.36□□□□□ -1.23not detected■□□□□ 11.3
RPS11-209ENST00000602252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36not detected■□□□□ 11.2
RPS11-209ENST00000602252 LARP4Q71RC2 724 aaKnown RBP eCLIP7.93□□□□□ -1.14not detected■□□□□ 10.9
RPS11-209ENST00000602252 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.59not detected■□□□□ 10.8
RPS11-209ENST00000602252 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.17□□□□□ -1.1not detected■□□□□ 10.8
RPS11-209ENST00000602252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.8□□□□□ -1not detected■□□□□ 10.7
RPS11-209ENST00000602252 GTF2F1P35269 517 aaKnown RBP eCLIP9.35□□□□□ -0.91not detected■□□□□ 10.6
RPS11-209ENST00000602252 RPS3P23396 243 aaKnown RBP eCLIP7.89□□□□□ -1.15not detected■□□□□ 10.4
RPS11-209ENST00000602252 RBM15Q96T37 977 aaKnown RBP eCLIP8.39□□□□□ -1.07not detected■□□□□ 10.4
RPS11-209ENST00000602252 ZRANB2O95218 330 aaKnown RBP eCLIP8.87□□□□□ -0.99not detected■□□□□ 10.1
RPS11-209ENST00000602252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23not detected■□□□□ 9.4
RPS11-209ENST00000602252 TIA1P31483 386 aaKnown RBP eCLIP7.71□□□□□ -1.18not detected■□□□□ 9.1
RPS11-209ENST00000602252 XRCC6P12956 609 aaKnown RBP eCLIP9.66□□□□□ -0.86not detected■□□□□ 9.1
RPS11-209ENST00000602252 METAP2P50579 478 aaKnown RBP eCLIP9.3□□□□□ -0.92not detected■□□□□ 8.9
RPS11-209ENST00000602252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9□□□□□ -0.97not detected■□□□□ 8
Retrieved 48 of 48 RNA–protein pairs in 10.6 ms