RNA–Protein interactions for RNA: ENST00000602194.5

SMIM7-220, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-220ENST00000602194 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
SMIM7-220ENST00000602194 ABCC9O60706 1549 aa23.23■■□□□ 1.31
SMIM7-220ENST00000602194 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
SMIM7-220ENST00000602194 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
SMIM7-220ENST00000602194 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
SMIM7-220ENST00000602194 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMIM7-220ENST00000602194 NACADO15069 1562 aa21.53■■□□□ 1.04
SMIM7-220ENST00000602194 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
SMIM7-220ENST00000602194 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
SMIM7-220ENST00000602194 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
SMIM7-220ENST00000602194 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
SMIM7-220ENST00000602194 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
SMIM7-220ENST00000602194 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
SMIM7-220ENST00000602194 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
SMIM7-220ENST00000602194 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
SMIM7-220ENST00000602194 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
SMIM7-220ENST00000602194 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SMIM7-220ENST00000602194 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
SMIM7-220ENST00000602194 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
SMIM7-220ENST00000602194 CUX2O14529 1486 aa20.11■□□□□ 0.81
SMIM7-220ENST00000602194 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
SMIM7-220ENST00000602194 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
SMIM7-220ENST00000602194 NESP48681 1621 aa19.84■□□□□ 0.77
SMIM7-220ENST00000602194 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
SMIM7-220ENST00000602194 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
SMIM7-220ENST00000602194 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
SMIM7-220ENST00000602194 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
SMIM7-220ENST00000602194 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SMIM7-220ENST00000602194 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
SMIM7-220ENST00000602194 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
SMIM7-220ENST00000602194 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
SMIM7-220ENST00000602194 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
SMIM7-220ENST00000602194 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
SMIM7-220ENST00000602194 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
SMIM7-220ENST00000602194 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
SMIM7-220ENST00000602194 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
SMIM7-220ENST00000602194 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SMIM7-220ENST00000602194 WDR62O43379 1518 aa19.3■□□□□ 0.68
SMIM7-220ENST00000602194 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
SMIM7-220ENST00000602194 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
SMIM7-220ENST00000602194 WIZO95785 1651 aa19.13■□□□□ 0.65
SMIM7-220ENST00000602194 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
SMIM7-220ENST00000602194 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
SMIM7-220ENST00000602194 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
SMIM7-220ENST00000602194 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
SMIM7-220ENST00000602194 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
SMIM7-220ENST00000602194 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
SMIM7-220ENST00000602194 CFTRP13569 1480 aa18.95■□□□□ 0.62
SMIM7-220ENST00000602194 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
SMIM7-220ENST00000602194 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
SMIM7-220ENST00000602194 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
SMIM7-220ENST00000602194 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
SMIM7-220ENST00000602194 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
SMIM7-220ENST00000602194 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
SMIM7-220ENST00000602194 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
SMIM7-220ENST00000602194 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
SMIM7-220ENST00000602194 CHD1O14646 1710 aa18.69■□□□□ 0.58
SMIM7-220ENST00000602194 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
SMIM7-220ENST00000602194 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
SMIM7-220ENST00000602194 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
SMIM7-220ENST00000602194 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
SMIM7-220ENST00000602194 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
SMIM7-220ENST00000602194 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
SMIM7-220ENST00000602194 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
SMIM7-220ENST00000602194 FBLN2P98095 1184 aa18.51■□□□□ 0.55
SMIM7-220ENST00000602194 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
SMIM7-220ENST00000602194 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
SMIM7-220ENST00000602194 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
SMIM7-220ENST00000602194 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SMIM7-220ENST00000602194 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
SMIM7-220ENST00000602194 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
SMIM7-220ENST00000602194 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
SMIM7-220ENST00000602194 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SMIM7-220ENST00000602194 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SMIM7-220ENST00000602194 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
SMIM7-220ENST00000602194 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
SMIM7-220ENST00000602194 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
SMIM7-220ENST00000602194 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
SMIM7-220ENST00000602194 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SMIM7-220ENST00000602194 CUX1P39880 1505 aa18.22■□□□□ 0.51
SMIM7-220ENST00000602194 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
SMIM7-220ENST00000602194 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
SMIM7-220ENST00000602194 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
SMIM7-220ENST00000602194 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
SMIM7-220ENST00000602194 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
SMIM7-220ENST00000602194 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
SMIM7-220ENST00000602194 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
SMIM7-220ENST00000602194 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
SMIM7-220ENST00000602194 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
SMIM7-220ENST00000602194 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
SMIM7-220ENST00000602194 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
SMIM7-220ENST00000602194 NUP160Q12769 1436 aa17.97■□□□□ 0.47
SMIM7-220ENST00000602194 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.45
SMIM7-220ENST00000602194 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
SMIM7-220ENST00000602194 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
SMIM7-220ENST00000602194 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
SMIM7-220ENST00000602194 DIP2BQ9P265 1576 aa17.79■□□□□ 0.44
SMIM7-220ENST00000602194 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
SMIM7-220ENST00000602194 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
SMIM7-220ENST00000602194 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms