RNA–Protein interactions for RNA: ENST00000601668.5

PNPLA6-223, Transcript of patatin like phospholipase domain containing 6, humanhuman

TSL 3

Gene PNPLA6, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA6-223ENST00000601668 NISCHQ9Y2I1 1504 aa49.25■■■■■ 5.48
PNPLA6-223ENST00000601668 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
PNPLA6-223ENST00000601668 ABCC9O60706 1549 aa42.95■■■■■ 4.47
PNPLA6-223ENST00000601668 RB1CC1Q8TDY2 1594 aa41.25■■■■■ 4.19
PNPLA6-223ENST00000601668 NACADO15069 1562 aa41.2■■■■■ 4.19
PNPLA6-223ENST00000601668 ZCCHC6Q5VYS8 1495 aaKnown RBP41.03■■■■■ 4.16
PNPLA6-223ENST00000601668 DCAF8L2P0C7V8 631 aa40.98■■■■■ 4.15
PNPLA6-223ENST00000601668 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
PNPLA6-223ENST00000601668 DCAF1Q9Y4B6 1507 aa40.74■■■■■ 4.11
PNPLA6-223ENST00000601668 UNC13AQ9UPW8 1703 aa40.51■■■■■ 4.08
PNPLA6-223ENST00000601668 BICRAQ9NZM4 1560 aa40.15■■■■■ 4.02
PNPLA6-223ENST00000601668 PABPN1Q86U42 306 aaKnown RBP eCLIP40.07■■■■■ 4.01
PNPLA6-223ENST00000601668 SCRIBQ14160 1630 aa40■■■■□ 3.99
PNPLA6-223ENST00000601668 SHROOM4Q9ULL8 1493 aa39.57■■■■□ 3.93
PNPLA6-223ENST00000601668 DNAJC5BQ9UF47 199 aa39.56■■■■□ 3.92
PNPLA6-223ENST00000601668 EIF4G1Q04637 1599 aaKnown RBP39.01■■■■□ 3.84
PNPLA6-223ENST00000601668 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
PNPLA6-223ENST00000601668 CECR2Q9BXF3 1484 aa38.57■■■■□ 3.76
PNPLA6-223ENST00000601668 SMARCA4P51532 1647 aa38.27■■■■□ 3.72
PNPLA6-223ENST00000601668 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
PNPLA6-223ENST00000601668 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
PNPLA6-223ENST00000601668 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
PNPLA6-223ENST00000601668 MROH2BQ7Z745 1585 aa38■■■■□ 3.67
PNPLA6-223ENST00000601668 SMARCA2P51531 1590 aa37.95■■■■□ 3.67
PNPLA6-223ENST00000601668 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
PNPLA6-223ENST00000601668 HMGXB3Q12766 1538 aa37.85■■■■□ 3.65
PNPLA6-223ENST00000601668 BAZ1BQ9UIG0 1483 aaKnown RBP37.68■■■■□ 3.62
PNPLA6-223ENST00000601668 WIZO95785 1651 aa37.6■■■■□ 3.61
PNPLA6-223ENST00000601668 RSF1Q96T23 1441 aaPredicted RBP37.49■■■■□ 3.59
PNPLA6-223ENST00000601668 NESP48681 1621 aa37.19■■■■□ 3.54
PNPLA6-223ENST00000601668 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
PNPLA6-223ENST00000601668 LAMC3Q9Y6N6 1575 aa37.03■■■■□ 3.52
PNPLA6-223ENST00000601668 ERCC6Q03468 1493 aa36.93■■■■□ 3.5
PNPLA6-223ENST00000601668 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
PNPLA6-223ENST00000601668 KIF21AQ7Z4S6 1674 aa36.79■■■■□ 3.48
PNPLA6-223ENST00000601668 CCDC88BA6NC98 1476 aa36.69■■■■□ 3.46
PNPLA6-223ENST00000601668 PDS5BQ9NTI5 1447 aa36.69■■■■□ 3.46
PNPLA6-223ENST00000601668 THOC2Q8NI27 1593 aaKnown RBP36.69■■■■□ 3.46
PNPLA6-223ENST00000601668 CFTRP13569 1480 aa36.68■■■■□ 3.46
PNPLA6-223ENST00000601668 CUX2O14529 1486 aa36.63■■■■□ 3.45
PNPLA6-223ENST00000601668 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
PNPLA6-223ENST00000601668 FANCD2Q9BXW9 1451 aa36.47■■■■□ 3.43
PNPLA6-223ENST00000601668 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
PNPLA6-223ENST00000601668 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
PNPLA6-223ENST00000601668 WDR62O43379 1518 aa36.34■■■■□ 3.41
PNPLA6-223ENST00000601668 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
PNPLA6-223ENST00000601668 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
PNPLA6-223ENST00000601668 TOPBP1Q92547 1522 aa35.92■■■■□ 3.34
PNPLA6-223ENST00000601668 DNMBPQ6XZF7 1577 aa35.86■■■■□ 3.33
PNPLA6-223ENST00000601668 ABCC8Q09428 1581 aa35.8■■■■□ 3.32
PNPLA6-223ENST00000601668 CUX1P39880 1505 aa35.65■■■■□ 3.3
PNPLA6-223ENST00000601668 IFT140Q96RY7 1462 aa35.65■■■■□ 3.3
PNPLA6-223ENST00000601668 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
PNPLA6-223ENST00000601668 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
PNPLA6-223ENST00000601668 ZNF608Q9ULD9 1512 aaPredicted RBP35.58■■■■□ 3.29
PNPLA6-223ENST00000601668 TARBP1Q13395 1621 aaKnown RBP35.58■■■■□ 3.29
PNPLA6-223ENST00000601668 FGD5Q6ZNL6 1462 aa35.49■■■■□ 3.27
PNPLA6-223ENST00000601668 RAD54L2Q9Y4B4 1467 aa35.45■■■■□ 3.27
PNPLA6-223ENST00000601668 EIF4G3O43432 1585 aaKnown RBP35.44■■■■□ 3.26
PNPLA6-223ENST00000601668 SOGA1O94964 1423 aa35.38■■■■□ 3.25
PNPLA6-223ENST00000601668 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.25
PNPLA6-223ENST00000601668 AQRO60306 1485 aaKnown RBP eCLIP35.32■■■■□ 3.24
PNPLA6-223ENST00000601668 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
PNPLA6-223ENST00000601668 WDR97A6NE52 1622 aa35.32■■■■□ 3.24
PNPLA6-223ENST00000601668 TOP2BQ02880 1626 aa35.29■■■■□ 3.24
PNPLA6-223ENST00000601668 WRNQ14191 1432 aaPredicted RBP eCLIP35.29■■■■□ 3.24
PNPLA6-223ENST00000601668 TDRD9Q8NDG6 1382 aaKnown RBP35.22■■■■□ 3.23
PNPLA6-223ENST00000601668 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
PNPLA6-223ENST00000601668 ABCA5Q8WWZ7 1642 aa35.07■■■■□ 3.21
PNPLA6-223ENST00000601668 CHD1O14646 1710 aa35.05■■■■□ 3.2
PNPLA6-223ENST00000601668 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
PNPLA6-223ENST00000601668 OSCARQ8IYS5 282 aa35■■■■□ 3.19
PNPLA6-223ENST00000601668 SNAPC4Q5SXM2 1469 aa35■■■■□ 3.19
PNPLA6-223ENST00000601668 GRIN2BQ13224 1484 aa34.99■■■■□ 3.19
PNPLA6-223ENST00000601668 GAPVD1Q14C86 1478 aa34.99■■■■□ 3.19
PNPLA6-223ENST00000601668 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
PNPLA6-223ENST00000601668 SYNJ2O15056 1496 aa34.79■■■■□ 3.16
PNPLA6-223ENST00000601668 FBLN2P98095 1184 aa34.77■■■■□ 3.16
PNPLA6-223ENST00000601668 ADAMTS12P58397 1594 aa34.73■■■■□ 3.15
PNPLA6-223ENST00000601668 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
PNPLA6-223ENST00000601668 CHMP7Q8WUX9 453 aaPredicted RBP34.67■■■■□ 3.14
PNPLA6-223ENST00000601668 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
PNPLA6-223ENST00000601668 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
PNPLA6-223ENST00000601668 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
PNPLA6-223ENST00000601668 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
PNPLA6-223ENST00000601668 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
PNPLA6-223ENST00000601668 FHAD1B1AJZ9 1412 aa34.57■■■■□ 3.13
PNPLA6-223ENST00000601668 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
PNPLA6-223ENST00000601668 KIF27Q86VH2 1401 aa34.52■■■■□ 3.12
PNPLA6-223ENST00000601668 CEP170Q5SW79 1584 aa34.48■■■■□ 3.11
PNPLA6-223ENST00000601668 NUP160Q12769 1436 aa34.46■■■■□ 3.11
PNPLA6-223ENST00000601668 IGF1RP08069 1367 aa34.45■■■■□ 3.11
PNPLA6-223ENST00000601668 CUL7Q14999 1698 aa34.38■■■■□ 3.09
PNPLA6-223ENST00000601668 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
PNPLA6-223ENST00000601668 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
PNPLA6-223ENST00000601668 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
PNPLA6-223ENST00000601668 SHROOM2Q13796 1616 aa34.26■■■■□ 3.07
PNPLA6-223ENST00000601668 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
PNPLA6-223ENST00000601668 ERCC6L2Q5T890 1561 aa34.2■■■■□ 3.07
PNPLA6-223ENST00000601668 CYB5RLQ6IPT4 315 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms