RNA–Protein interactions for RNA: ENST00000601419.5

SELENOW-213, Transcript of selenoprotein W, humanhuman

TSL 2

Gene SELENOW, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOW-213ENST00000601419 AQRO60306 1485 aaKnown RBP eCLIP29.07■■■□□ 2.242e-7■■■■■ 188.6
SELENOW-213ENST00000601419 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.24e-14■■■■■ 73.8
SELENOW-213ENST00000601419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.95□□□□□ -0.181e-11■■■■■ 42.4
SELENOW-213ENST00000601419 EFTUD2Q15029 972 aaKnown RBP eCLIP15.04■□□□□ -06e-9■■■■■ 29.1
SELENOW-213ENST00000601419 YBX3P16989 372 aaKnown RBP eCLIP21.72■■□□□ 1.074e-7■■■■□ 22.3
SELENOW-213ENST00000601419 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.342e-8■■■■□ 20
SELENOW-213ENST00000601419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.51■■□□□ 1.835e-6■■■■□ 19.7
SELENOW-213ENST00000601419 PCBP2Q15366 365 aaKnown RBP eCLIP14.94□□□□□ -0.025e-7■■■□□ 19.1
SELENOW-213ENST00000601419 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.596e-8■■■□□ 17.3
SELENOW-213ENST00000601419 AKAP1Q92667 903 aaKnown RBP eCLIP14.22□□□□□ -0.135e-6■■□□□ 14.3
SELENOW-213ENST00000601419 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.34■□□□□ 0.691e-8■■□□□ 13
SELENOW-213ENST00000601419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.96■□□□□ 0.795e-6■■□□□ 11.5
SELENOW-213ENST00000601419 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.714e-7■□□□□ 11.2
SELENOW-213ENST00000601419 PRPF4O43172 522 aaKnown RBP eCLIP15.23■□□□□ 0.033e-6■□□□□ 11
SELENOW-213ENST00000601419 SF3B4Q15427 424 aaKnown RBP eCLIP14.58□□□□□ -0.085e-7■□□□□ 10.3
SELENOW-213ENST00000601419 PPIGQ13427 754 aaKnown RBP eCLIP18.7■□□□□ 0.589e-9■□□□□ 10.2
SELENOW-213ENST00000601419 PTBP1P26599 531 aaKnown RBP eCLIP12.07□□□□□ -0.485e-7■□□□□ 9.6
SELENOW-213ENST00000601419 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■□□□□ 8.9
Retrieved 18 of 18 RNA–protein pairs in 6.5 ms