RNA–Protein interactions for RNA: ENST00000601140.1

ZNF83-216, Transcript of zinc finger protein 83, humanhuman

TSL 3

Gene ZNF83, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF83-216ENST00000601140 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
ZNF83-216ENST00000601140 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
ZNF83-216ENST00000601140 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
ZNF83-216ENST00000601140 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
ZNF83-216ENST00000601140 FOXD1Q16676 465 aa16.33■□□□□ 0.2
ZNF83-216ENST00000601140 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
ZNF83-216ENST00000601140 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
ZNF83-216ENST00000601140 ADRA2BP18089 450 aa15.52■□□□□ 0.08
ZNF83-216ENST00000601140 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
ZNF83-216ENST00000601140 MSH5O43196 834 aa15.2■□□□□ 0.02
ZNF83-216ENST00000601140 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
ZNF83-216ENST00000601140 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
ZNF83-216ENST00000601140 POTEDQ86YR6 584 aa14.15□□□□□ -0.14
ZNF83-216ENST00000601140 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
ZNF83-216ENST00000601140 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
ZNF83-216ENST00000601140 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
ZNF83-216ENST00000601140 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
ZNF83-216ENST00000601140 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
ZNF83-216ENST00000601140 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
ZNF83-216ENST00000601140 KCNA4P22459 653 aa13.62□□□□□ -0.23
ZNF83-216ENST00000601140 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
ZNF83-216ENST00000601140 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
ZNF83-216ENST00000601140 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
ZNF83-216ENST00000601140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.339e-7■□□□□ 9.1
ZNF83-216ENST00000601140 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
ZNF83-216ENST00000601140 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
ZNF83-216ENST00000601140 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
ZNF83-216ENST00000601140 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
ZNF83-216ENST00000601140 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
ZNF83-216ENST00000601140 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
ZNF83-216ENST00000601140 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
ZNF83-216ENST00000601140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
ZNF83-216ENST00000601140 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
ZNF83-216ENST00000601140 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
ZNF83-216ENST00000601140 APLP2Q06481 763 aa12.54□□□□□ -0.4
ZNF83-216ENST00000601140 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
ZNF83-216ENST00000601140 ZBTB22O15209 634 aa12.51□□□□□ -0.41
ZNF83-216ENST00000601140 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
ZNF83-216ENST00000601140 CAPN15O75808 1086 aa12.43□□□□□ -0.42
ZNF83-216ENST00000601140 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
ZNF83-216ENST00000601140 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
ZNF83-216ENST00000601140 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
ZNF83-216ENST00000601140 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
ZNF83-216ENST00000601140 DSG3P32926 999 aa12.28□□□□□ -0.44
ZNF83-216ENST00000601140 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
ZNF83-216ENST00000601140 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
ZNF83-216ENST00000601140 ABCB7O75027 752 aa12.13□□□□□ -0.47
ZNF83-216ENST00000601140 POLA2Q14181 598 aa12.07□□□□□ -0.48
ZNF83-216ENST00000601140 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
ZNF83-216ENST00000601140 FBLN2P98095 1184 aa11.77□□□□□ -0.53
ZNF83-216ENST00000601140 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
ZNF83-216ENST00000601140 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
ZNF83-216ENST00000601140 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
ZNF83-216ENST00000601140 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
ZNF83-216ENST00000601140 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
ZNF83-216ENST00000601140 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
ZNF83-216ENST00000601140 AKT1S1Q96B36 256 aa11.55□□□□□ -0.56
ZNF83-216ENST00000601140 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
ZNF83-216ENST00000601140 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
ZNF83-216ENST00000601140 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
ZNF83-216ENST00000601140 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
ZNF83-216ENST00000601140 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
ZNF83-216ENST00000601140 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
ZNF83-216ENST00000601140 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
ZNF83-216ENST00000601140 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
ZNF83-216ENST00000601140 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
ZNF83-216ENST00000601140 POTEHQ6S545 545 aa11.18□□□□□ -0.62
ZNF83-216ENST00000601140 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
ZNF83-216ENST00000601140 PROM2Q8N271 834 aa11.14□□□□□ -0.63
ZNF83-216ENST00000601140 FKBP8Q14318 412 aa11.13□□□□□ -0.63
ZNF83-216ENST00000601140 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
ZNF83-216ENST00000601140 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
ZNF83-216ENST00000601140 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
ZNF83-216ENST00000601140 PRR29P0C7W0 189 aa11.09□□□□□ -0.63
ZNF83-216ENST00000601140 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
ZNF83-216ENST00000601140 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
ZNF83-216ENST00000601140 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
ZNF83-216ENST00000601140 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
ZNF83-216ENST00000601140 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
ZNF83-216ENST00000601140 HAX1O00165 279 aa10.81□□□□□ -0.68
ZNF83-216ENST00000601140 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
ZNF83-216ENST00000601140 MIER1Q8N108 512 aa10.77□□□□□ -0.69
ZNF83-216ENST00000601140 C19orf67A6NJJ6 358 aa10.75□□□□□ -0.69
ZNF83-216ENST00000601140 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
ZNF83-216ENST00000601140 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
ZNF83-216ENST00000601140 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
ZNF83-216ENST00000601140 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
ZNF83-216ENST00000601140 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
ZNF83-216ENST00000601140 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
ZNF83-216ENST00000601140 SP7Q8TDD2 431 aaPredicted RBP10.66□□□□□ -0.7
ZNF83-216ENST00000601140 EVX2Q03828 476 aa10.65□□□□□ -0.7
ZNF83-216ENST00000601140 PAK3O75914 559 aaPredicted RBP10.6□□□□□ -0.71
ZNF83-216ENST00000601140 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
ZNF83-216ENST00000601140 CLCN6P51797 869 aa10.55□□□□□ -0.72
ZNF83-216ENST00000601140 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
ZNF83-216ENST00000601140 ZNF579Q8NAF0 562 aaKnown RBP10.53□□□□□ -0.72
ZNF83-216ENST00000601140 NUBP1P53384 320 aa10.52□□□□□ -0.73
ZNF83-216ENST00000601140 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
ZNF83-216ENST00000601140 GABBR2O75899 941 aa10.49□□□□□ -0.73
ZNF83-216ENST00000601140 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms