RNA–Protein interactions for RNA: ENST00000600448.5

SARS2-213, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene SARS2, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-213ENST00000600448 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.27
SARS2-213ENST00000600448 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
SARS2-213ENST00000600448 ABCC9O60706 1549 aa25.88■■□□□ 1.73
SARS2-213ENST00000600448 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
SARS2-213ENST00000600448 NACADO15069 1562 aa24.61■■□□□ 1.53
SARS2-213ENST00000600448 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
SARS2-213ENST00000600448 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
SARS2-213ENST00000600448 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
SARS2-213ENST00000600448 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
SARS2-213ENST00000600448 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
SARS2-213ENST00000600448 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.453e-6■■■■□ 23.3
SARS2-213ENST00000600448 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
SARS2-213ENST00000600448 DNAJC5BQ9UF47 199 aa24.03■■□□□ 1.44
SARS2-213ENST00000600448 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
SARS2-213ENST00000600448 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
SARS2-213ENST00000600448 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
SARS2-213ENST00000600448 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
SARS2-213ENST00000600448 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
SARS2-213ENST00000600448 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
SARS2-213ENST00000600448 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
SARS2-213ENST00000600448 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
SARS2-213ENST00000600448 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
SARS2-213ENST00000600448 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
SARS2-213ENST00000600448 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
SARS2-213ENST00000600448 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
SARS2-213ENST00000600448 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
SARS2-213ENST00000600448 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
SARS2-213ENST00000600448 NESP48681 1621 aa22.33■■□□□ 1.17
SARS2-213ENST00000600448 WIZO95785 1651 aa22.31■■□□□ 1.16
SARS2-213ENST00000600448 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
SARS2-213ENST00000600448 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
SARS2-213ENST00000600448 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
SARS2-213ENST00000600448 CUX2O14529 1486 aa22.15■■□□□ 1.14
SARS2-213ENST00000600448 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
SARS2-213ENST00000600448 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
SARS2-213ENST00000600448 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
SARS2-213ENST00000600448 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
SARS2-213ENST00000600448 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
SARS2-213ENST00000600448 CFTRP13569 1480 aa21.88■■□□□ 1.09
SARS2-213ENST00000600448 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
SARS2-213ENST00000600448 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
SARS2-213ENST00000600448 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
SARS2-213ENST00000600448 DNAJC5Q9H3Z4 198 aa21.8■■□□□ 1.08
SARS2-213ENST00000600448 WDR62O43379 1518 aa21.8■■□□□ 1.08
SARS2-213ENST00000600448 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
SARS2-213ENST00000600448 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
SARS2-213ENST00000600448 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
SARS2-213ENST00000600448 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
SARS2-213ENST00000600448 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
SARS2-213ENST00000600448 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
SARS2-213ENST00000600448 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
SARS2-213ENST00000600448 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
SARS2-213ENST00000600448 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
SARS2-213ENST00000600448 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
SARS2-213ENST00000600448 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
SARS2-213ENST00000600448 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
SARS2-213ENST00000600448 CUX1P39880 1505 aa21.2■□□□□ 0.98
SARS2-213ENST00000600448 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
SARS2-213ENST00000600448 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
SARS2-213ENST00000600448 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
SARS2-213ENST00000600448 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
SARS2-213ENST00000600448 SOGA1O94964 1423 aa21.12■□□□□ 0.97
SARS2-213ENST00000600448 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
SARS2-213ENST00000600448 WDR97A6NE52 1622 aa21■□□□□ 0.95
SARS2-213ENST00000600448 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
SARS2-213ENST00000600448 CHD1O14646 1710 aa20.98■□□□□ 0.95
SARS2-213ENST00000600448 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
SARS2-213ENST00000600448 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
SARS2-213ENST00000600448 FBLN2P98095 1184 aa20.93■□□□□ 0.94
SARS2-213ENST00000600448 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
SARS2-213ENST00000600448 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
SARS2-213ENST00000600448 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
SARS2-213ENST00000600448 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
SARS2-213ENST00000600448 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
SARS2-213ENST00000600448 RIMBP3CA6NJZ7 1639 aa20.9■□□□□ 0.94
SARS2-213ENST00000600448 RIMBP3BA6NNM3 1639 aa20.9■□□□□ 0.94
SARS2-213ENST00000600448 RIMBP3Q9UFD9 1639 aa20.9■□□□□ 0.94
SARS2-213ENST00000600448 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
SARS2-213ENST00000600448 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
SARS2-213ENST00000600448 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SARS2-213ENST00000600448 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
SARS2-213ENST00000600448 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
SARS2-213ENST00000600448 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
SARS2-213ENST00000600448 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
SARS2-213ENST00000600448 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
SARS2-213ENST00000600448 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
SARS2-213ENST00000600448 ARAP1Q96P48 1450 aa20.71■□□□□ 0.91
SARS2-213ENST00000600448 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
SARS2-213ENST00000600448 GRIN2AQ12879 1464 aa20.67■□□□□ 0.9
SARS2-213ENST00000600448 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
SARS2-213ENST00000600448 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
SARS2-213ENST00000600448 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
SARS2-213ENST00000600448 NUP160Q12769 1436 aa20.59■□□□□ 0.89
SARS2-213ENST00000600448 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
SARS2-213ENST00000600448 KIF27Q86VH2 1401 aa20.5■□□□□ 0.87
SARS2-213ENST00000600448 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
SARS2-213ENST00000600448 IGF1RP08069 1367 aa20.46■□□□□ 0.87
SARS2-213ENST00000600448 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
SARS2-213ENST00000600448 CUL7Q14999 1698 aa20.4■□□□□ 0.86
SARS2-213ENST00000600448 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms