RNA–Protein interactions for RNA: ENST00000600348.2

AC008555.2-201, humanhuman

TSL 5 BASIC

Gene AC008555.2, Length 1,714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.2-201ENST00000600348 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
AC008555.2-201ENST00000600348 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
AC008555.2-201ENST00000600348 ABCC9O60706 1549 aa24.37■■□□□ 1.49
AC008555.2-201ENST00000600348 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.45
AC008555.2-201ENST00000600348 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
AC008555.2-201ENST00000600348 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
AC008555.2-201ENST00000600348 NACADO15069 1562 aa23.68■■□□□ 1.38
AC008555.2-201ENST00000600348 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
AC008555.2-201ENST00000600348 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
AC008555.2-201ENST00000600348 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
AC008555.2-201ENST00000600348 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
AC008555.2-201ENST00000600348 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
AC008555.2-201ENST00000600348 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
AC008555.2-201ENST00000600348 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
AC008555.2-201ENST00000600348 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
AC008555.2-201ENST00000600348 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
AC008555.2-201ENST00000600348 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
AC008555.2-201ENST00000600348 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
AC008555.2-201ENST00000600348 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
AC008555.2-201ENST00000600348 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
AC008555.2-201ENST00000600348 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
AC008555.2-201ENST00000600348 WIZO95785 1651 aa22.11■■□□□ 1.13
AC008555.2-201ENST00000600348 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
AC008555.2-201ENST00000600348 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
AC008555.2-201ENST00000600348 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
AC008555.2-201ENST00000600348 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
AC008555.2-201ENST00000600348 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
AC008555.2-201ENST00000600348 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
AC008555.2-201ENST00000600348 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
AC008555.2-201ENST00000600348 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.08
AC008555.2-201ENST00000600348 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
AC008555.2-201ENST00000600348 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
AC008555.2-201ENST00000600348 NESP48681 1621 aa21.28■■□□□ 1
AC008555.2-201ENST00000600348 CADPSQ9ULU8 1353 aa21.27■■□□□ 1
AC008555.2-201ENST00000600348 CFTRP13569 1480 aa21.26■□□□□ 0.99
AC008555.2-201ENST00000600348 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
AC008555.2-201ENST00000600348 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
AC008555.2-201ENST00000600348 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
AC008555.2-201ENST00000600348 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
AC008555.2-201ENST00000600348 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
AC008555.2-201ENST00000600348 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
AC008555.2-201ENST00000600348 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
AC008555.2-201ENST00000600348 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
AC008555.2-201ENST00000600348 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
AC008555.2-201ENST00000600348 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
AC008555.2-201ENST00000600348 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
AC008555.2-201ENST00000600348 CUX1P39880 1505 aa20.87■□□□□ 0.93
AC008555.2-201ENST00000600348 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
AC008555.2-201ENST00000600348 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
AC008555.2-201ENST00000600348 MRC2Q9UBG0 1479 aa20.8■□□□□ 0.92
AC008555.2-201ENST00000600348 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
AC008555.2-201ENST00000600348 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
AC008555.2-201ENST00000600348 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
AC008555.2-201ENST00000600348 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
AC008555.2-201ENST00000600348 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
AC008555.2-201ENST00000600348 WDR62O43379 1518 aa20.71■□□□□ 0.91
AC008555.2-201ENST00000600348 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
AC008555.2-201ENST00000600348 POLA1P09884 1462 aaPredicted RBP20.66■□□□□ 0.9
AC008555.2-201ENST00000600348 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
AC008555.2-201ENST00000600348 SOGA1O94964 1423 aa20.57■□□□□ 0.88
AC008555.2-201ENST00000600348 CUX2O14529 1486 aa20.57■□□□□ 0.88
AC008555.2-201ENST00000600348 TARBP1Q13395 1621 aaKnown RBP20.52■□□□□ 0.88
AC008555.2-201ENST00000600348 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
AC008555.2-201ENST00000600348 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
AC008555.2-201ENST00000600348 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
AC008555.2-201ENST00000600348 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
AC008555.2-201ENST00000600348 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
AC008555.2-201ENST00000600348 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
AC008555.2-201ENST00000600348 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
AC008555.2-201ENST00000600348 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
AC008555.2-201ENST00000600348 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
AC008555.2-201ENST00000600348 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
AC008555.2-201ENST00000600348 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
AC008555.2-201ENST00000600348 EEA1Q15075 1411 aa20.34■□□□□ 0.85
AC008555.2-201ENST00000600348 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
AC008555.2-201ENST00000600348 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
AC008555.2-201ENST00000600348 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
AC008555.2-201ENST00000600348 IGF1RP08069 1367 aa20.28■□□□□ 0.84
AC008555.2-201ENST00000600348 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.83
AC008555.2-201ENST00000600348 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
AC008555.2-201ENST00000600348 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
AC008555.2-201ENST00000600348 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
AC008555.2-201ENST00000600348 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
AC008555.2-201ENST00000600348 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
AC008555.2-201ENST00000600348 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
AC008555.2-201ENST00000600348 CUL7Q14999 1698 aa20.17■□□□□ 0.82
AC008555.2-201ENST00000600348 KIF21BO75037 1637 aa20.16■□□□□ 0.82
AC008555.2-201ENST00000600348 ADAMTS12P58397 1594 aa20.15■□□□□ 0.82
AC008555.2-201ENST00000600348 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
AC008555.2-201ENST00000600348 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
AC008555.2-201ENST00000600348 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
AC008555.2-201ENST00000600348 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
AC008555.2-201ENST00000600348 FBLN2P98095 1184 aa20.04■□□□□ 0.8
AC008555.2-201ENST00000600348 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
AC008555.2-201ENST00000600348 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
AC008555.2-201ENST00000600348 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
AC008555.2-201ENST00000600348 CHD1O14646 1710 aa20■□□□□ 0.79
AC008555.2-201ENST00000600348 GRIN2AQ12879 1464 aa20■□□□□ 0.79
AC008555.2-201ENST00000600348 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
AC008555.2-201ENST00000600348 CTTNBP2Q8WZ74 1663 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms