RNA–Protein interactions for RNA: ENST00000599898.5

RPL18A-204, Transcript of ribosomal protein L18a, humanhuman

TSL 2 BASIC

Gene RPL18A, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18A-204ENST00000599898 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
RPL18A-204ENST00000599898 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
RPL18A-204ENST00000599898 ABCC9O60706 1549 aa29.38■■■□□ 2.29
RPL18A-204ENST00000599898 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
RPL18A-204ENST00000599898 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
RPL18A-204ENST00000599898 RB1CC1Q8TDY2 1594 aa28.29■■■□□ 2.12
RPL18A-204ENST00000599898 NACADO15069 1562 aa28.28■■■□□ 2.12
RPL18A-204ENST00000599898 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
RPL18A-204ENST00000599898 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
RPL18A-204ENST00000599898 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
RPL18A-204ENST00000599898 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
RPL18A-204ENST00000599898 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
RPL18A-204ENST00000599898 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
RPL18A-204ENST00000599898 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
RPL18A-204ENST00000599898 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
RPL18A-204ENST00000599898 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
RPL18A-204ENST00000599898 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
RPL18A-204ENST00000599898 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
RPL18A-204ENST00000599898 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
RPL18A-204ENST00000599898 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
RPL18A-204ENST00000599898 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
RPL18A-204ENST00000599898 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
RPL18A-204ENST00000599898 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
RPL18A-204ENST00000599898 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
RPL18A-204ENST00000599898 WIZO95785 1651 aa26.06■■□□□ 1.76
RPL18A-204ENST00000599898 NCAPD3P42695 1498 aa26.05■■□□□ 1.76
RPL18A-204ENST00000599898 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
RPL18A-204ENST00000599898 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
RPL18A-204ENST00000599898 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
RPL18A-204ENST00000599898 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
RPL18A-204ENST00000599898 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
RPL18A-204ENST00000599898 NESP48681 1621 aa25.48■■□□□ 1.67
RPL18A-204ENST00000599898 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
RPL18A-204ENST00000599898 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
RPL18A-204ENST00000599898 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
RPL18A-204ENST00000599898 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
RPL18A-204ENST00000599898 CFTRP13569 1480 aa25.24■■□□□ 1.63
RPL18A-204ENST00000599898 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
RPL18A-204ENST00000599898 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
RPL18A-204ENST00000599898 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
RPL18A-204ENST00000599898 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
RPL18A-204ENST00000599898 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
RPL18A-204ENST00000599898 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
RPL18A-204ENST00000599898 MRC2Q9UBG0 1479 aa24.97■■□□□ 1.59
RPL18A-204ENST00000599898 WDR62O43379 1518 aa24.86■■□□□ 1.57
RPL18A-204ENST00000599898 CUX2O14529 1486 aa24.85■■□□□ 1.57
RPL18A-204ENST00000599898 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
RPL18A-204ENST00000599898 TOPBP1Q92547 1522 aa24.74■■□□□ 1.55
RPL18A-204ENST00000599898 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
RPL18A-204ENST00000599898 DNAJC5Q9H3Z4 198 aa24.69■■□□□ 1.54
RPL18A-204ENST00000599898 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
RPL18A-204ENST00000599898 CUX1P39880 1505 aa24.66■■□□□ 1.54
RPL18A-204ENST00000599898 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.525e-6■■□□□ 12.5
RPL18A-204ENST00000599898 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
RPL18A-204ENST00000599898 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
RPL18A-204ENST00000599898 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
RPL18A-204ENST00000599898 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
RPL18A-204ENST00000599898 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
RPL18A-204ENST00000599898 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
RPL18A-204ENST00000599898 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
RPL18A-204ENST00000599898 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
RPL18A-204ENST00000599898 SOGA1O94964 1423 aa24.42■■□□□ 1.5
RPL18A-204ENST00000599898 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
RPL18A-204ENST00000599898 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
RPL18A-204ENST00000599898 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
RPL18A-204ENST00000599898 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.481e-7■■■■■ 39.5
RPL18A-204ENST00000599898 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
RPL18A-204ENST00000599898 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
RPL18A-204ENST00000599898 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
RPL18A-204ENST00000599898 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
RPL18A-204ENST00000599898 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
RPL18A-204ENST00000599898 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
RPL18A-204ENST00000599898 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
RPL18A-204ENST00000599898 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
RPL18A-204ENST00000599898 CHD1O14646 1710 aa24.03■■□□□ 1.44
RPL18A-204ENST00000599898 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
RPL18A-204ENST00000599898 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
RPL18A-204ENST00000599898 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
RPL18A-204ENST00000599898 FBLN2P98095 1184 aa23.99■■□□□ 1.43
RPL18A-204ENST00000599898 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
RPL18A-204ENST00000599898 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
RPL18A-204ENST00000599898 RUSC2Q8N2Y8 1516 aa23.93■■□□□ 1.42
RPL18A-204ENST00000599898 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
RPL18A-204ENST00000599898 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
RPL18A-204ENST00000599898 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
RPL18A-204ENST00000599898 IGF1RP08069 1367 aa23.85■■□□□ 1.41
RPL18A-204ENST00000599898 CUL7Q14999 1698 aa23.85■■□□□ 1.41
RPL18A-204ENST00000599898 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
RPL18A-204ENST00000599898 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RPL18A-204ENST00000599898 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
RPL18A-204ENST00000599898 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
RPL18A-204ENST00000599898 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
RPL18A-204ENST00000599898 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
RPL18A-204ENST00000599898 EEA1Q15075 1411 aa23.68■■□□□ 1.38
RPL18A-204ENST00000599898 NUP160Q12769 1436 aa23.67■■□□□ 1.38
RPL18A-204ENST00000599898 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
RPL18A-204ENST00000599898 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
RPL18A-204ENST00000599898 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
RPL18A-204ENST00000599898 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
RPL18A-204ENST00000599898 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms