RNA–Protein interactions for RNA: ENST00000599840.5
Retrieved 9 of 9 RNA–protein pairs in 7.5 ms
MPND-207, Transcript of MPN domain containing, human
APPRIS ALT2 TSL 5 BASIC
Gene MPND, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
MPND-207 | ENST00000599840 | SF3A3 | Q12874 | 501 aa | Known RBP eCLIP | 30.36 | ■■■□□ 2.45 | 2e-8 | ■■■□□ 17.3 |
MPND-207 | ENST00000599840 | PPIG | Q13427 | 754 aa | Known RBP eCLIP | 31.82 | ■■■□□ 2.68 | 1e-7 | ■■■■□ 20.9 |
MPND-207 | ENST00000599840 | SUPV3L1 | Q8IYB8 | 786 aa | Known RBP eCLIP | 29.4 | ■■■□□ 2.3 | 2e-7 | ■■■■■ 278.5 |
MPND-207 | ENST00000599840 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 24.47 | ■■□□□ 1.51 | 6e-7 | ■■■■■ 31 |
MPND-207 | ENST00000599840 | SF3B4 | Q15427 | 424 aa | Known RBP eCLIP | 26.79 | ■■□□□ 1.88 | 8e-7 | ■■■■■ 32.7 |
MPND-207 | ENST00000599840 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 32.96 | ■■■□□ 2.87 | 1e-6 | ■■■■■ 29.4 |
MPND-207 | ENST00000599840 | GRSF1 | Q12849 | 480 aa | Known RBP eCLIP | 30.18 | ■■■□□ 2.42 | 3e-6 | ■■□□□ 12.8 |
MPND-207 | ENST00000599840 | BUD13 | Q9BRD0 | 619 aa | Known RBP eCLIP | 32.39 | ■■■□□ 2.78 | 4e-6 | ■□□□□ 8 |
MPND-207 | ENST00000599840 | EFTUD2 | Q15029 | 972 aa | Known RBP eCLIP | 31.13 | ■■■□□ 2.57 | 7e-6 | ■■□□□ 12.2 |