RNA–Protein interactions for RNA: ENST00000599704.5

EMP3-209, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-209ENST00000599704 NISCHQ9Y2I1 1504 aa35.49■■■■□ 3.27
EMP3-209ENST00000599704 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
EMP3-209ENST00000599704 ABCC9O60706 1549 aa31.51■■■□□ 2.63
EMP3-209ENST00000599704 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
EMP3-209ENST00000599704 NACADO15069 1562 aa29.91■■■□□ 2.38
EMP3-209ENST00000599704 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
EMP3-209ENST00000599704 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
EMP3-209ENST00000599704 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
EMP3-209ENST00000599704 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
EMP3-209ENST00000599704 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
EMP3-209ENST00000599704 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
EMP3-209ENST00000599704 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
EMP3-209ENST00000599704 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
EMP3-209ENST00000599704 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
EMP3-209ENST00000599704 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
EMP3-209ENST00000599704 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
EMP3-209ENST00000599704 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
EMP3-209ENST00000599704 CECR2Q9BXF3 1484 aa28.32■■■□□ 2.12
EMP3-209ENST00000599704 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
EMP3-209ENST00000599704 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
EMP3-209ENST00000599704 NCAPD3P42695 1498 aa27.57■■■□□ 2
EMP3-209ENST00000599704 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
EMP3-209ENST00000599704 SMARCA2P51531 1590 aa27.52■■■□□ 2
EMP3-209ENST00000599704 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
EMP3-209ENST00000599704 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.98
EMP3-209ENST00000599704 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
EMP3-209ENST00000599704 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
EMP3-209ENST00000599704 NESP48681 1621 aa27.16■■□□□ 1.94
EMP3-209ENST00000599704 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
EMP3-209ENST00000599704 WIZO95785 1651 aa27.11■■□□□ 1.93
EMP3-209ENST00000599704 RSF1Q96T23 1441 aaPredicted RBP27.05■■□□□ 1.92
EMP3-209ENST00000599704 CUX2O14529 1486 aa26.97■■□□□ 1.91
EMP3-209ENST00000599704 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
EMP3-209ENST00000599704 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
EMP3-209ENST00000599704 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
EMP3-209ENST00000599704 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
EMP3-209ENST00000599704 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
EMP3-209ENST00000599704 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
EMP3-209ENST00000599704 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
EMP3-209ENST00000599704 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
EMP3-209ENST00000599704 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
EMP3-209ENST00000599704 CFTRP13569 1480 aa26.53■■□□□ 1.84
EMP3-209ENST00000599704 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.83
EMP3-209ENST00000599704 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
EMP3-209ENST00000599704 WDR62O43379 1518 aa26.49■■□□□ 1.83
EMP3-209ENST00000599704 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
EMP3-209ENST00000599704 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
EMP3-209ENST00000599704 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
EMP3-209ENST00000599704 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
EMP3-209ENST00000599704 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
EMP3-209ENST00000599704 IFT140Q96RY7 1462 aa25.94■■□□□ 1.74
EMP3-209ENST00000599704 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
EMP3-209ENST00000599704 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
EMP3-209ENST00000599704 EIF4G3O43432 1585 aaKnown RBP25.85■■□□□ 1.73
EMP3-209ENST00000599704 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
EMP3-209ENST00000599704 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
EMP3-209ENST00000599704 CUX1P39880 1505 aa25.73■■□□□ 1.71
EMP3-209ENST00000599704 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
EMP3-209ENST00000599704 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
EMP3-209ENST00000599704 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.72e-7■■■■□ 23.4
EMP3-209ENST00000599704 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
EMP3-209ENST00000599704 SOGA1O94964 1423 aa25.63■■□□□ 1.69
EMP3-209ENST00000599704 CHD1O14646 1710 aa25.63■■□□□ 1.69
EMP3-209ENST00000599704 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
EMP3-209ENST00000599704 TDRD9Q8NDG6 1382 aaKnown RBP25.58■■□□□ 1.69
EMP3-209ENST00000599704 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
EMP3-209ENST00000599704 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
EMP3-209ENST00000599704 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
EMP3-209ENST00000599704 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
EMP3-209ENST00000599704 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
EMP3-209ENST00000599704 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
EMP3-209ENST00000599704 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
EMP3-209ENST00000599704 FBLN2P98095 1184 aa25.44■■□□□ 1.66
EMP3-209ENST00000599704 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
EMP3-209ENST00000599704 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
EMP3-209ENST00000599704 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
EMP3-209ENST00000599704 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
EMP3-209ENST00000599704 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
EMP3-209ENST00000599704 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
EMP3-209ENST00000599704 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
EMP3-209ENST00000599704 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
EMP3-209ENST00000599704 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
EMP3-209ENST00000599704 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
EMP3-209ENST00000599704 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
EMP3-209ENST00000599704 CHMP7Q8WUX9 453 aaPredicted RBP25.26■■□□□ 1.63
EMP3-209ENST00000599704 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
EMP3-209ENST00000599704 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
EMP3-209ENST00000599704 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
EMP3-209ENST00000599704 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
EMP3-209ENST00000599704 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
EMP3-209ENST00000599704 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
EMP3-209ENST00000599704 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
EMP3-209ENST00000599704 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
EMP3-209ENST00000599704 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
EMP3-209ENST00000599704 NUP160Q12769 1436 aa24.98■■□□□ 1.59
EMP3-209ENST00000599704 ERCC6L2Q5T890 1561 aa24.96■■□□□ 1.59
EMP3-209ENST00000599704 EEA1Q15075 1411 aa24.89■■□□□ 1.58
EMP3-209ENST00000599704 SHROOM2Q13796 1616 aa24.89■■□□□ 1.57
EMP3-209ENST00000599704 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
EMP3-209ENST00000599704 CUL7Q14999 1698 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms