RNA–Protein interactions for RNA: ENST00000598831.5

SARS2-211, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5 BASIC

Gene SARS2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-211ENST00000598831 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
SARS2-211ENST00000598831 CCDC180Q9P1Z9 1646 aa27.14■■□□□ 1.94
SARS2-211ENST00000598831 ABCC9O60706 1549 aa26.67■■□□□ 1.86
SARS2-211ENST00000598831 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
SARS2-211ENST00000598831 NACADO15069 1562 aa25.55■■□□□ 1.68
SARS2-211ENST00000598831 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
SARS2-211ENST00000598831 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
SARS2-211ENST00000598831 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
SARS2-211ENST00000598831 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
SARS2-211ENST00000598831 UNC13AQ9UPW8 1703 aa24.99■■□□□ 1.59
SARS2-211ENST00000598831 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
SARS2-211ENST00000598831 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.569e-7■■■■□ 20.2
SARS2-211ENST00000598831 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
SARS2-211ENST00000598831 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
SARS2-211ENST00000598831 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
SARS2-211ENST00000598831 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
SARS2-211ENST00000598831 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
SARS2-211ENST00000598831 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
SARS2-211ENST00000598831 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
SARS2-211ENST00000598831 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
SARS2-211ENST00000598831 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
SARS2-211ENST00000598831 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
SARS2-211ENST00000598831 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
SARS2-211ENST00000598831 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
SARS2-211ENST00000598831 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
SARS2-211ENST00000598831 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
SARS2-211ENST00000598831 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
SARS2-211ENST00000598831 WIZO95785 1651 aa23.05■■□□□ 1.28
SARS2-211ENST00000598831 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
SARS2-211ENST00000598831 NESP48681 1621 aa23.01■■□□□ 1.27
SARS2-211ENST00000598831 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
SARS2-211ENST00000598831 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
SARS2-211ENST00000598831 CUX2O14529 1486 aa22.96■■□□□ 1.27
SARS2-211ENST00000598831 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
SARS2-211ENST00000598831 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
SARS2-211ENST00000598831 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
SARS2-211ENST00000598831 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
SARS2-211ENST00000598831 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
SARS2-211ENST00000598831 CFTRP13569 1480 aa22.67■■□□□ 1.22
SARS2-211ENST00000598831 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
SARS2-211ENST00000598831 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
SARS2-211ENST00000598831 WDR62O43379 1518 aa22.59■■□□□ 1.21
SARS2-211ENST00000598831 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
SARS2-211ENST00000598831 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
SARS2-211ENST00000598831 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
SARS2-211ENST00000598831 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
SARS2-211ENST00000598831 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
SARS2-211ENST00000598831 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
SARS2-211ENST00000598831 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
SARS2-211ENST00000598831 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
SARS2-211ENST00000598831 IFT140Q96RY7 1462 aa22.14■■□□□ 1.13
SARS2-211ENST00000598831 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
SARS2-211ENST00000598831 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
SARS2-211ENST00000598831 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
SARS2-211ENST00000598831 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
SARS2-211ENST00000598831 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
SARS2-211ENST00000598831 CUX1P39880 1505 aa21.94■■□□□ 1.1
SARS2-211ENST00000598831 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
SARS2-211ENST00000598831 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
SARS2-211ENST00000598831 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
SARS2-211ENST00000598831 SOGA1O94964 1423 aa21.83■■□□□ 1.09
SARS2-211ENST00000598831 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.08
SARS2-211ENST00000598831 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
SARS2-211ENST00000598831 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
SARS2-211ENST00000598831 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
SARS2-211ENST00000598831 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
SARS2-211ENST00000598831 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
SARS2-211ENST00000598831 CHD1O14646 1710 aa21.69■■□□□ 1.06
SARS2-211ENST00000598831 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
SARS2-211ENST00000598831 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
SARS2-211ENST00000598831 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
SARS2-211ENST00000598831 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
SARS2-211ENST00000598831 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
SARS2-211ENST00000598831 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
SARS2-211ENST00000598831 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
SARS2-211ENST00000598831 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
SARS2-211ENST00000598831 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
SARS2-211ENST00000598831 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
SARS2-211ENST00000598831 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
SARS2-211ENST00000598831 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
SARS2-211ENST00000598831 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
SARS2-211ENST00000598831 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
SARS2-211ENST00000598831 FBLN2P98095 1184 aa21.52■■□□□ 1.04
SARS2-211ENST00000598831 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
SARS2-211ENST00000598831 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
SARS2-211ENST00000598831 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
SARS2-211ENST00000598831 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
SARS2-211ENST00000598831 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
SARS2-211ENST00000598831 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
SARS2-211ENST00000598831 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
SARS2-211ENST00000598831 NUP160Q12769 1436 aa21.35■■□□□ 1.01
SARS2-211ENST00000598831 CEP170Q5SW79 1584 aa21.31■■□□□ 1
SARS2-211ENST00000598831 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
SARS2-211ENST00000598831 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
SARS2-211ENST00000598831 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
SARS2-211ENST00000598831 CUL7Q14999 1698 aa21.2■□□□□ 0.98
SARS2-211ENST00000598831 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
SARS2-211ENST00000598831 IGF1RP08069 1367 aa21.15■□□□□ 0.98
SARS2-211ENST00000598831 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
SARS2-211ENST00000598831 KIAA0586Q9BVV6 1533 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms