RNA–Protein interactions for RNA: ENST00000598633.1

PRKD2-211, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-211ENST00000598633 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
PRKD2-211ENST00000598633 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
PRKD2-211ENST00000598633 ABCC9O60706 1549 aa27.24■■□□□ 1.95
PRKD2-211ENST00000598633 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
PRKD2-211ENST00000598633 NACADO15069 1562 aa25.93■■□□□ 1.74
PRKD2-211ENST00000598633 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
PRKD2-211ENST00000598633 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
PRKD2-211ENST00000598633 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
PRKD2-211ENST00000598633 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
PRKD2-211ENST00000598633 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
PRKD2-211ENST00000598633 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
PRKD2-211ENST00000598633 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
PRKD2-211ENST00000598633 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
PRKD2-211ENST00000598633 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
PRKD2-211ENST00000598633 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
PRKD2-211ENST00000598633 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
PRKD2-211ENST00000598633 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
PRKD2-211ENST00000598633 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
PRKD2-211ENST00000598633 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
PRKD2-211ENST00000598633 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
PRKD2-211ENST00000598633 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
PRKD2-211ENST00000598633 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
PRKD2-211ENST00000598633 CUX2O14529 1486 aa23.72■■□□□ 1.39
PRKD2-211ENST00000598633 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
PRKD2-211ENST00000598633 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
PRKD2-211ENST00000598633 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
PRKD2-211ENST00000598633 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
PRKD2-211ENST00000598633 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
PRKD2-211ENST00000598633 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
PRKD2-211ENST00000598633 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
PRKD2-211ENST00000598633 NESP48681 1621 aa23.33■■□□□ 1.32
PRKD2-211ENST00000598633 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
PRKD2-211ENST00000598633 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
PRKD2-211ENST00000598633 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
PRKD2-211ENST00000598633 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
PRKD2-211ENST00000598633 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
PRKD2-211ENST00000598633 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
PRKD2-211ENST00000598633 WIZO95785 1651 aa22.98■■□□□ 1.27
PRKD2-211ENST00000598633 WDR62O43379 1518 aa22.95■■□□□ 1.26
PRKD2-211ENST00000598633 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
PRKD2-211ENST00000598633 CFTRP13569 1480 aa22.88■■□□□ 1.25
PRKD2-211ENST00000598633 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
PRKD2-211ENST00000598633 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
PRKD2-211ENST00000598633 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
PRKD2-211ENST00000598633 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
PRKD2-211ENST00000598633 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
PRKD2-211ENST00000598633 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
PRKD2-211ENST00000598633 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
PRKD2-211ENST00000598633 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
PRKD2-211ENST00000598633 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
PRKD2-211ENST00000598633 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
PRKD2-211ENST00000598633 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
PRKD2-211ENST00000598633 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
PRKD2-211ENST00000598633 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
PRKD2-211ENST00000598633 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
PRKD2-211ENST00000598633 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
PRKD2-211ENST00000598633 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
PRKD2-211ENST00000598633 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
PRKD2-211ENST00000598633 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
PRKD2-211ENST00000598633 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
PRKD2-211ENST00000598633 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
PRKD2-211ENST00000598633 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
PRKD2-211ENST00000598633 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.136e-7■■■■■ 27.8
PRKD2-211ENST00000598633 SOGA1O94964 1423 aa22.08■■□□□ 1.13
PRKD2-211ENST00000598633 CHD1O14646 1710 aa22■■□□□ 1.11
PRKD2-211ENST00000598633 FBLN2P98095 1184 aa22■■□□□ 1.11
PRKD2-211ENST00000598633 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
PRKD2-211ENST00000598633 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
PRKD2-211ENST00000598633 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
PRKD2-211ENST00000598633 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
PRKD2-211ENST00000598633 CYB5RLQ6IPT4 315 aa21.96■■□□□ 1.11
PRKD2-211ENST00000598633 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
PRKD2-211ENST00000598633 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
PRKD2-211ENST00000598633 CUX1P39880 1505 aa21.92■■□□□ 1.1
PRKD2-211ENST00000598633 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
PRKD2-211ENST00000598633 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
PRKD2-211ENST00000598633 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
PRKD2-211ENST00000598633 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
PRKD2-211ENST00000598633 CLASP1Q7Z460 1538 aa21.85■■□□□ 1.09
PRKD2-211ENST00000598633 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.08
PRKD2-211ENST00000598633 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
PRKD2-211ENST00000598633 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
PRKD2-211ENST00000598633 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
PRKD2-211ENST00000598633 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
PRKD2-211ENST00000598633 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
PRKD2-211ENST00000598633 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
PRKD2-211ENST00000598633 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
PRKD2-211ENST00000598633 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
PRKD2-211ENST00000598633 BIVM-ERCC5R4GMW8 1640 aa21.61■■□□□ 1.05
PRKD2-211ENST00000598633 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
PRKD2-211ENST00000598633 NUP160Q12769 1436 aa21.57■■□□□ 1.04
PRKD2-211ENST00000598633 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
PRKD2-211ENST00000598633 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
PRKD2-211ENST00000598633 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
PRKD2-211ENST00000598633 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
PRKD2-211ENST00000598633 JPH4Q96JJ6 628 aa21.35■■□□□ 1.01
PRKD2-211ENST00000598633 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
PRKD2-211ENST00000598633 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
PRKD2-211ENST00000598633 KIF27Q86VH2 1401 aa21.29■■□□□ 1
PRKD2-211ENST00000598633 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms