RNA–Protein interactions for RNA: ENST00000598563.5

SARS2-209, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene SARS2, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-209ENST00000598563 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
SARS2-209ENST00000598563 ABCC9O60706 1549 aa33.07■■■□□ 2.89
SARS2-209ENST00000598563 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
SARS2-209ENST00000598563 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
SARS2-209ENST00000598563 NACADO15069 1562 aa31.28■■■□□ 2.6
SARS2-209ENST00000598563 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
SARS2-209ENST00000598563 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
SARS2-209ENST00000598563 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
SARS2-209ENST00000598563 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.525e-6■■■■□ 22.2
SARS2-209ENST00000598563 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
SARS2-209ENST00000598563 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
SARS2-209ENST00000598563 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
SARS2-209ENST00000598563 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
SARS2-209ENST00000598563 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
SARS2-209ENST00000598563 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
SARS2-209ENST00000598563 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
SARS2-209ENST00000598563 EIF4G1Q04637 1599 aaKnown RBP29.82■■■□□ 2.36
SARS2-209ENST00000598563 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SARS2-209ENST00000598563 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
SARS2-209ENST00000598563 ATAD2BQ9ULI0 1458 aa28.81■■■□□ 2.2
SARS2-209ENST00000598563 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
SARS2-209ENST00000598563 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
SARS2-209ENST00000598563 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
SARS2-209ENST00000598563 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
SARS2-209ENST00000598563 ERCC6Q03468 1493 aa28.54■■■□□ 2.16
SARS2-209ENST00000598563 CUX2O14529 1486 aa28.53■■■□□ 2.16
SARS2-209ENST00000598563 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
SARS2-209ENST00000598563 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
SARS2-209ENST00000598563 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
SARS2-209ENST00000598563 NESP48681 1621 aa28.42■■■□□ 2.14
SARS2-209ENST00000598563 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
SARS2-209ENST00000598563 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
SARS2-209ENST00000598563 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
SARS2-209ENST00000598563 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
SARS2-209ENST00000598563 WIZO95785 1651 aa28.06■■■□□ 2.08
SARS2-209ENST00000598563 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
SARS2-209ENST00000598563 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
SARS2-209ENST00000598563 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
SARS2-209ENST00000598563 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
SARS2-209ENST00000598563 WDR62O43379 1518 aa27.76■■■□□ 2.03
SARS2-209ENST00000598563 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
SARS2-209ENST00000598563 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
SARS2-209ENST00000598563 CFTRP13569 1480 aa27.7■■■□□ 2.02
SARS2-209ENST00000598563 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
SARS2-209ENST00000598563 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
SARS2-209ENST00000598563 CCDC88BA6NC98 1476 aa27.42■■□□□ 1.98
SARS2-209ENST00000598563 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
SARS2-209ENST00000598563 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
SARS2-209ENST00000598563 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
SARS2-209ENST00000598563 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
SARS2-209ENST00000598563 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
SARS2-209ENST00000598563 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
SARS2-209ENST00000598563 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
SARS2-209ENST00000598563 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
SARS2-209ENST00000598563 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
SARS2-209ENST00000598563 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SARS2-209ENST00000598563 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
SARS2-209ENST00000598563 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
SARS2-209ENST00000598563 RIMBP3CA6NJZ7 1639 aa26.84■■□□□ 1.89
SARS2-209ENST00000598563 RIMBP3BA6NNM3 1639 aa26.84■■□□□ 1.89
SARS2-209ENST00000598563 RIMBP3Q9UFD9 1639 aa26.84■■□□□ 1.89
SARS2-209ENST00000598563 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
SARS2-209ENST00000598563 ARHGEF11O15085 1522 aa26.77■■□□□ 1.88
SARS2-209ENST00000598563 SOGA1O94964 1423 aa26.77■■□□□ 1.88
SARS2-209ENST00000598563 CHD1O14646 1710 aa26.73■■□□□ 1.87
SARS2-209ENST00000598563 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
SARS2-209ENST00000598563 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
SARS2-209ENST00000598563 CUX1P39880 1505 aa26.7■■□□□ 1.86
SARS2-209ENST00000598563 FBLN2P98095 1184 aa26.67■■□□□ 1.86
SARS2-209ENST00000598563 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
SARS2-209ENST00000598563 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
SARS2-209ENST00000598563 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
SARS2-209ENST00000598563 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
SARS2-209ENST00000598563 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
SARS2-209ENST00000598563 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
SARS2-209ENST00000598563 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
SARS2-209ENST00000598563 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
SARS2-209ENST00000598563 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
SARS2-209ENST00000598563 SYNJ2O15056 1496 aa26.45■■□□□ 1.82
SARS2-209ENST00000598563 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
SARS2-209ENST00000598563 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
SARS2-209ENST00000598563 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
SARS2-209ENST00000598563 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
SARS2-209ENST00000598563 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
SARS2-209ENST00000598563 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
SARS2-209ENST00000598563 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
SARS2-209ENST00000598563 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
SARS2-209ENST00000598563 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
SARS2-209ENST00000598563 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
SARS2-209ENST00000598563 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
SARS2-209ENST00000598563 NUP160Q12769 1436 aa26.12■■□□□ 1.77
SARS2-209ENST00000598563 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
SARS2-209ENST00000598563 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
SARS2-209ENST00000598563 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
SARS2-209ENST00000598563 ERCC6L2Q5T890 1561 aa26.05■■□□□ 1.76
SARS2-209ENST00000598563 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
SARS2-209ENST00000598563 PRG4Q92954 1404 aaPredicted RBP25.85■■□□□ 1.73
SARS2-209ENST00000598563 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
SARS2-209ENST00000598563 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
SARS2-209ENST00000598563 IGF1RP08069 1367 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms