RNA–Protein interactions for RNA: ENST00000598428.2

AC016885.3-201, humanhuman

BASIC

Gene AC016885.3, Length 258 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016885.3-201ENST00000598428 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
AC016885.3-201ENST00000598428 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
AC016885.3-201ENST00000598428 ABCC9O60706 1549 aa22.08■■□□□ 1.13
AC016885.3-201ENST00000598428 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
AC016885.3-201ENST00000598428 NACADO15069 1562 aa21.31■■□□□ 1
AC016885.3-201ENST00000598428 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
AC016885.3-201ENST00000598428 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
AC016885.3-201ENST00000598428 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
AC016885.3-201ENST00000598428 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
AC016885.3-201ENST00000598428 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
AC016885.3-201ENST00000598428 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
AC016885.3-201ENST00000598428 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
AC016885.3-201ENST00000598428 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
AC016885.3-201ENST00000598428 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
AC016885.3-201ENST00000598428 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
AC016885.3-201ENST00000598428 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
AC016885.3-201ENST00000598428 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
AC016885.3-201ENST00000598428 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
AC016885.3-201ENST00000598428 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
AC016885.3-201ENST00000598428 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
AC016885.3-201ENST00000598428 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
AC016885.3-201ENST00000598428 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
AC016885.3-201ENST00000598428 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
AC016885.3-201ENST00000598428 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
AC016885.3-201ENST00000598428 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
AC016885.3-201ENST00000598428 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
AC016885.3-201ENST00000598428 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
AC016885.3-201ENST00000598428 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
AC016885.3-201ENST00000598428 WIZO95785 1651 aa19.48■□□□□ 0.71
AC016885.3-201ENST00000598428 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
AC016885.3-201ENST00000598428 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
AC016885.3-201ENST00000598428 NESP48681 1621 aa19.15■□□□□ 0.66
AC016885.3-201ENST00000598428 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
AC016885.3-201ENST00000598428 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
AC016885.3-201ENST00000598428 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
AC016885.3-201ENST00000598428 CFTRP13569 1480 aa19.03■□□□□ 0.64
AC016885.3-201ENST00000598428 ERCC6Q03468 1493 aa19■□□□□ 0.63
AC016885.3-201ENST00000598428 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
AC016885.3-201ENST00000598428 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
AC016885.3-201ENST00000598428 KIF21AQ7Z4S6 1674 aa18.88■□□□□ 0.61
AC016885.3-201ENST00000598428 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
AC016885.3-201ENST00000598428 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
AC016885.3-201ENST00000598428 CUX2O14529 1486 aa18.8■□□□□ 0.6
AC016885.3-201ENST00000598428 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
AC016885.3-201ENST00000598428 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
AC016885.3-201ENST00000598428 WDR62O43379 1518 aa18.73■□□□□ 0.59
AC016885.3-201ENST00000598428 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
AC016885.3-201ENST00000598428 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
AC016885.3-201ENST00000598428 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
AC016885.3-201ENST00000598428 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
AC016885.3-201ENST00000598428 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
AC016885.3-201ENST00000598428 CUX1P39880 1505 aa18.49■□□□□ 0.55
AC016885.3-201ENST00000598428 IFT140Q96RY7 1462 aa18.46■□□□□ 0.54
AC016885.3-201ENST00000598428 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
AC016885.3-201ENST00000598428 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
AC016885.3-201ENST00000598428 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
AC016885.3-201ENST00000598428 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
AC016885.3-201ENST00000598428 SOGA1O94964 1423 aa18.37■□□□□ 0.53
AC016885.3-201ENST00000598428 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
AC016885.3-201ENST00000598428 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
AC016885.3-201ENST00000598428 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
AC016885.3-201ENST00000598428 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
AC016885.3-201ENST00000598428 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
AC016885.3-201ENST00000598428 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
AC016885.3-201ENST00000598428 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
AC016885.3-201ENST00000598428 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
AC016885.3-201ENST00000598428 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
AC016885.3-201ENST00000598428 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
AC016885.3-201ENST00000598428 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
AC016885.3-201ENST00000598428 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
AC016885.3-201ENST00000598428 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
AC016885.3-201ENST00000598428 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
AC016885.3-201ENST00000598428 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
AC016885.3-201ENST00000598428 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
AC016885.3-201ENST00000598428 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
AC016885.3-201ENST00000598428 OSCARQ8IYS5 282 aa18.06■□□□□ 0.48
AC016885.3-201ENST00000598428 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
AC016885.3-201ENST00000598428 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
AC016885.3-201ENST00000598428 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
AC016885.3-201ENST00000598428 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
AC016885.3-201ENST00000598428 FBLN2P98095 1184 aa17.99■□□□□ 0.47
AC016885.3-201ENST00000598428 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
AC016885.3-201ENST00000598428 IGF1RP08069 1367 aa17.98■□□□□ 0.47
AC016885.3-201ENST00000598428 CHD1O14646 1710 aa17.97■□□□□ 0.47
AC016885.3-201ENST00000598428 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
AC016885.3-201ENST00000598428 EEA1Q15075 1411 aa17.97■□□□□ 0.47
AC016885.3-201ENST00000598428 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
AC016885.3-201ENST00000598428 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
AC016885.3-201ENST00000598428 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
AC016885.3-201ENST00000598428 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
AC016885.3-201ENST00000598428 NUP160Q12769 1436 aa17.85■□□□□ 0.45
AC016885.3-201ENST00000598428 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
AC016885.3-201ENST00000598428 CUL7Q14999 1698 aa17.84■□□□□ 0.45
AC016885.3-201ENST00000598428 CLASP1Q7Z460 1538 aa17.84■□□□□ 0.45
AC016885.3-201ENST00000598428 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
AC016885.3-201ENST00000598428 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
AC016885.3-201ENST00000598428 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
AC016885.3-201ENST00000598428 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
AC016885.3-201ENST00000598428 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
AC016885.3-201ENST00000598428 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms