RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 NISCHQ9Y2I1 1504 aa49.14■■■■■ 5.46
COPE-207ENST00000597646 CCDC180Q9P1Z9 1646 aa43.9■■■■■ 4.62
COPE-207ENST00000597646 ABCC9O60706 1549 aa43.69■■■■■ 4.59
COPE-207ENST00000597646 RB1CC1Q8TDY2 1594 aa41.69■■■■■ 4.26
COPE-207ENST00000597646 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
COPE-207ENST00000597646 NACADO15069 1562 aa41.45■■■■■ 4.23
COPE-207ENST00000597646 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
COPE-207ENST00000597646 PABPN1Q86U42 306 aaKnown RBP eCLIP40.79■■■■■ 4.12
COPE-207ENST00000597646 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
COPE-207ENST00000597646 UNC13AQ9UPW8 1703 aa40.73■■■■■ 4.11
COPE-207ENST00000597646 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.09
COPE-207ENST00000597646 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
COPE-207ENST00000597646 BICRAQ9NZM4 1560 aa40.39■■■■■ 4.06
COPE-207ENST00000597646 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
COPE-207ENST00000597646 SHROOM4Q9ULL8 1493 aa39.83■■■■□ 3.97
COPE-207ENST00000597646 CC2D2AQ9P2K1 1620 aa39.43■■■■□ 3.9
COPE-207ENST00000597646 EIF4G1Q04637 1599 aaKnown RBP39.41■■■■□ 3.9
COPE-207ENST00000597646 CECR2Q9BXF3 1484 aa39.29■■■■□ 3.88
COPE-207ENST00000597646 SMARCA4P51532 1647 aa38.27■■■■□ 3.72
COPE-207ENST00000597646 NCAPD3P42695 1498 aa38.24■■■■□ 3.71
COPE-207ENST00000597646 ATAD2BQ9ULI0 1458 aa38.21■■■■□ 3.71
COPE-207ENST00000597646 SMARCA2P51531 1590 aa38.14■■■■□ 3.7
COPE-207ENST00000597646 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
COPE-207ENST00000597646 HMGXB3Q12766 1538 aa37.98■■■■□ 3.67
COPE-207ENST00000597646 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
COPE-207ENST00000597646 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
COPE-207ENST00000597646 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
COPE-207ENST00000597646 ERCC6Q03468 1493 aa37.74■■■■□ 3.63
COPE-207ENST00000597646 NESP48681 1621 aa37.61■■■■□ 3.61
COPE-207ENST00000597646 WIZO95785 1651 aa37.49■■■■□ 3.59
COPE-207ENST00000597646 CUX2O14529 1486 aa37.43■■■■□ 3.58
COPE-207ENST00000597646 LAMC3Q9Y6N6 1575 aa37.35■■■■□ 3.57
COPE-207ENST00000597646 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
COPE-207ENST00000597646 PDS5BQ9NTI5 1447 aa37.18■■■■□ 3.54
COPE-207ENST00000597646 CADPSQ9ULU8 1353 aa37.16■■■■□ 3.54
COPE-207ENST00000597646 KIF21AQ7Z4S6 1674 aa37.13■■■■□ 3.53
COPE-207ENST00000597646 THOC2Q8NI27 1593 aaKnown RBP37.08■■■■□ 3.53
COPE-207ENST00000597646 DNAJC5Q9H3Z4 198 aa37.05■■■■□ 3.52
COPE-207ENST00000597646 TOP2AP11388 1531 aaKnown RBP36.99■■■■□ 3.51
COPE-207ENST00000597646 MRC2Q9UBG0 1479 aa36.81■■■■□ 3.48
COPE-207ENST00000597646 CFTRP13569 1480 aa36.76■■■■□ 3.48
COPE-207ENST00000597646 CEP164Q9UPV0 1460 aa36.76■■■■□ 3.48
COPE-207ENST00000597646 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
COPE-207ENST00000597646 WDR62O43379 1518 aa36.65■■■■□ 3.46
COPE-207ENST00000597646 CCDC88BA6NC98 1476 aa36.61■■■■□ 3.45
COPE-207ENST00000597646 PRDM2Q13029 1718 aa36.45■■■■□ 3.43
COPE-207ENST00000597646 URB2Q14146 1524 aaKnown RBP36.39■■■■□ 3.42
COPE-207ENST00000597646 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
COPE-207ENST00000597646 SUPT5HO00267 1087 aaKnown RBP36.07■■■■□ 3.36
COPE-207ENST00000597646 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
COPE-207ENST00000597646 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
COPE-207ENST00000597646 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
COPE-207ENST00000597646 ZNF608Q9ULD9 1512 aaPredicted RBP35.9■■■■□ 3.34
COPE-207ENST00000597646 OSCARQ8IYS5 282 aa35.9■■■■□ 3.34
COPE-207ENST00000597646 TRIM41Q8WV44 630 aa35.74■■■■□ 3.31
COPE-207ENST00000597646 POLA1P09884 1462 aaPredicted RBP35.72■■■■□ 3.31
COPE-207ENST00000597646 EIF4G3O43432 1585 aaKnown RBP35.71■■■■□ 3.31
COPE-207ENST00000597646 TARBP1Q13395 1621 aaKnown RBP35.68■■■■□ 3.3
COPE-207ENST00000597646 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.31e-7■■■□□ 17
COPE-207ENST00000597646 RAD54L2Q9Y4B4 1467 aa35.63■■■■□ 3.29
COPE-207ENST00000597646 SOGA1O94964 1423 aa35.63■■■■□ 3.29
COPE-207ENST00000597646 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
COPE-207ENST00000597646 CUX1P39880 1505 aa35.57■■■■□ 3.28
COPE-207ENST00000597646 TDRD9Q8NDG6 1382 aaKnown RBP35.52■■■■□ 3.28
COPE-207ENST00000597646 FBLN2P98095 1184 aa35.51■■■■□ 3.28
COPE-207ENST00000597646 CHD1O14646 1710 aa35.42■■■■□ 3.26
COPE-207ENST00000597646 WDR97A6NE52 1622 aa35.32■■■■□ 3.24
COPE-207ENST00000597646 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.24
COPE-207ENST00000597646 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.24
COPE-207ENST00000597646 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.24
COPE-207ENST00000597646 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
COPE-207ENST00000597646 GRIN2BQ13224 1484 aa35.24■■■■□ 3.23
COPE-207ENST00000597646 CHMP7Q8WUX9 453 aaPredicted RBP35.24■■■■□ 3.23
COPE-207ENST00000597646 ARHGEF11O15085 1522 aa35.23■■■■□ 3.23
COPE-207ENST00000597646 GAPVD1Q14C86 1478 aa35.17■■■■□ 3.22
COPE-207ENST00000597646 MAGI1Q96QZ7 1491 aaPredicted RBP35.17■■■■□ 3.22
COPE-207ENST00000597646 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
COPE-207ENST00000597646 ABCA10Q8WWZ4 1543 aa35.15■■■■□ 3.22
COPE-207ENST00000597646 PBRM1Q86U86 1689 aa35.13■■■■□ 3.21
COPE-207ENST00000597646 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
COPE-207ENST00000597646 BIVM-ERCC5R4GMW8 1640 aa35.08■■■■□ 3.21
COPE-207ENST00000597646 CYB5RLQ6IPT4 315 aa35.08■■■■□ 3.21
COPE-207ENST00000597646 SYNJ1O43426 1573 aa35.08■■■■□ 3.21
COPE-207ENST00000597646 SYNJ2O15056 1496 aa35.07■■■■□ 3.2
COPE-207ENST00000597646 ABCA5Q8WWZ7 1642 aa35.05■■■■□ 3.2
COPE-207ENST00000597646 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
COPE-207ENST00000597646 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
COPE-207ENST00000597646 ADAMTS12P58397 1594 aa34.78■■■■□ 3.16
COPE-207ENST00000597646 GRIN2AQ12879 1464 aa34.78■■■■□ 3.16
COPE-207ENST00000597646 FHAD1B1AJZ9 1412 aa34.73■■■■□ 3.15
COPE-207ENST00000597646 ERICH3Q5RHP9 1530 aa34.72■■■■□ 3.15
COPE-207ENST00000597646 TRHP20396 242 aaPredicted RBP34.65■■■■□ 3.14
COPE-207ENST00000597646 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
COPE-207ENST00000597646 NUP160Q12769 1436 aa34.59■■■■□ 3.13
COPE-207ENST00000597646 KIF27Q86VH2 1401 aa34.47■■■■□ 3.11
COPE-207ENST00000597646 ERCC6L2Q5T890 1561 aa34.47■■■■□ 3.11
COPE-207ENST00000597646 IGF1RP08069 1367 aa34.39■■■■□ 3.1
COPE-207ENST00000597646 SHROOM2Q13796 1616 aa34.39■■■■□ 3.1
COPE-207ENST00000597646 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
COPE-207ENST00000597646 PRG4Q92954 1404 aaPredicted RBP34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms