RNA–Protein interactions for RNA: ENST00000597131.1

CRLF1-205, Transcript of cytokine receptor like factor 1, humanhuman

TSL 2

Gene CRLF1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-205ENST00000597131 NISCHQ9Y2I1 1504 aa56.38■■■■■ 6.62
CRLF1-205ENST00000597131 CCDC180Q9P1Z9 1646 aa50.49■■■■■ 5.67
CRLF1-205ENST00000597131 ABCC9O60706 1549 aa49.56■■■■■ 5.52
CRLF1-205ENST00000597131 RB1CC1Q8TDY2 1594 aa47.64■■■■■ 5.22
CRLF1-205ENST00000597131 NACADO15069 1562 aa47.47■■■■■ 5.19
CRLF1-205ENST00000597131 MYO15BQ96JP2 1530 aa47.06■■■■■ 5.12
CRLF1-205ENST00000597131 DCAF8L2P0C7V8 631 aa47.05■■■■■ 5.12
CRLF1-205ENST00000597131 ZCCHC6Q5VYS8 1495 aaKnown RBP46.91■■■■■ 5.1
CRLF1-205ENST00000597131 DCAF1Q9Y4B6 1507 aa46.7■■■■■ 5.07
CRLF1-205ENST00000597131 UNC13AQ9UPW8 1703 aa46.63■■■■■ 5.06
CRLF1-205ENST00000597131 BICRAQ9NZM4 1560 aa46.14■■■■■ 4.98
CRLF1-205ENST00000597131 PABPN1Q86U42 306 aaKnown RBP eCLIP46.11■■■■■ 4.97
CRLF1-205ENST00000597131 SCRIBQ14160 1630 aa45.9■■■■■ 4.94
CRLF1-205ENST00000597131 SHROOM4Q9ULL8 1493 aa45.75■■■■■ 4.91
CRLF1-205ENST00000597131 DNAJC5BQ9UF47 199 aa45.69■■■■■ 4.9
CRLF1-205ENST00000597131 EIF4G1Q04637 1599 aaKnown RBP44.99■■■■■ 4.79
CRLF1-205ENST00000597131 CC2D2AQ9P2K1 1620 aa44.9■■■■■ 4.78
CRLF1-205ENST00000597131 CECR2Q9BXF3 1484 aa44.6■■■■■ 4.73
CRLF1-205ENST00000597131 SMARCA4P51532 1647 aa43.9■■■■■ 4.62
CRLF1-205ENST00000597131 BAZ1AQ9NRL2 1556 aaPredicted RBP43.79■■■■■ 4.6
CRLF1-205ENST00000597131 NCAPD3P42695 1498 aa43.71■■■■■ 4.59
CRLF1-205ENST00000597131 SMARCA2P51531 1590 aa43.7■■■■■ 4.59
CRLF1-205ENST00000597131 ATAD2BQ9ULI0 1458 aa43.67■■■■■ 4.58
CRLF1-205ENST00000597131 HMGXB3Q12766 1538 aa43.58■■■■■ 4.57
CRLF1-205ENST00000597131 PEG3Q9GZU2 1588 aa43.5■■■■■ 4.55
CRLF1-205ENST00000597131 MROH2BQ7Z745 1585 aa43.4■■■■■ 4.54
CRLF1-205ENST00000597131 BAZ1BQ9UIG0 1483 aaKnown RBP43.33■■■■■ 4.53
CRLF1-205ENST00000597131 WIZO95785 1651 aa42.97■■■■■ 4.47
CRLF1-205ENST00000597131 ERCC6Q03468 1493 aa42.81■■■■■ 4.44
CRLF1-205ENST00000597131 NESP48681 1621 aa42.75■■■■■ 4.43
CRLF1-205ENST00000597131 LAMC3Q9Y6N6 1575 aa42.73■■■■■ 4.43
CRLF1-205ENST00000597131 RSF1Q96T23 1441 aaPredicted RBP42.71■■■■■ 4.43
CRLF1-205ENST00000597131 CUX2O14529 1486 aa42.55■■■■■ 4.4
CRLF1-205ENST00000597131 TOP2AP11388 1531 aaKnown RBP42.53■■■■■ 4.4
CRLF1-205ENST00000597131 KIF21AQ7Z4S6 1674 aa42.41■■■■■ 4.38
CRLF1-205ENST00000597131 CADPSQ9ULU8 1353 aa42.39■■■■■ 4.38
CRLF1-205ENST00000597131 PDS5BQ9NTI5 1447 aa42.37■■■■■ 4.37
CRLF1-205ENST00000597131 THOC2Q8NI27 1593 aaKnown RBP42.35■■■■■ 4.37
CRLF1-205ENST00000597131 CFTRP13569 1480 aa42.09■■■■■ 4.33
CRLF1-205ENST00000597131 PRDM2Q13029 1718 aa42■■■■■ 4.31
CRLF1-205ENST00000597131 MRC2Q9UBG0 1479 aa41.99■■■■■ 4.31
CRLF1-205ENST00000597131 CEP164Q9UPV0 1460 aa41.98■■■■■ 4.31
CRLF1-205ENST00000597131 FANCD2Q9BXW9 1451 aa41.94■■■■■ 4.3
CRLF1-205ENST00000597131 CCDC88BA6NC98 1476 aa41.92■■■■■ 4.3
CRLF1-205ENST00000597131 WDR62O43379 1518 aa41.9■■■■■ 4.3
CRLF1-205ENST00000597131 DNAJC5Q9H3Z4 198 aa41.55■■■■■ 4.24
CRLF1-205ENST00000597131 URB2Q14146 1524 aaKnown RBP41.54■■■■■ 4.24
CRLF1-205ENST00000597131 ABCC8Q09428 1581 aa41.26■■■■■ 4.2
CRLF1-205ENST00000597131 TOPBP1Q92547 1522 aa41.24■■■■■ 4.19
CRLF1-205ENST00000597131 DNMBPQ6XZF7 1577 aa41.22■■■■■ 4.19
CRLF1-205ENST00000597131 SUPT5HO00267 1087 aaKnown RBP41.21■■■■■ 4.19
CRLF1-205ENST00000597131 IFT140Q96RY7 1462 aa41.1■■■■■ 4.17
CRLF1-205ENST00000597131 ZNF608Q9ULD9 1512 aaPredicted RBP40.88■■■■■ 4.13
CRLF1-205ENST00000597131 TARBP1Q13395 1621 aaKnown RBP40.87■■■■■ 4.13
CRLF1-205ENST00000597131 POLA1P09884 1462 aaPredicted RBP40.86■■■■■ 4.13
CRLF1-205ENST00000597131 EIF4G3O43432 1585 aaKnown RBP40.84■■■■■ 4.13
CRLF1-205ENST00000597131 CUX1P39880 1505 aa40.77■■■■■ 4.12
CRLF1-205ENST00000597131 FGD5Q6ZNL6 1462 aa40.7■■■■■ 4.11
CRLF1-205ENST00000597131 WDR97A6NE52 1622 aa40.64■■■■■ 4.1
CRLF1-205ENST00000597131 SOGA1O94964 1423 aa40.62■■■■■ 4.09
CRLF1-205ENST00000597131 RAD54L2Q9Y4B4 1467 aa40.62■■■■■ 4.09
CRLF1-205ENST00000597131 OSCARQ8IYS5 282 aa40.56■■■■■ 4.08
CRLF1-205ENST00000597131 AQRO60306 1485 aaKnown RBP eCLIP40.56■■■■■ 4.083e-7■■■□□ 15
CRLF1-205ENST00000597131 CHD1O14646 1710 aa40.44■■■■■ 4.06
CRLF1-205ENST00000597131 BIVM-ERCC5R4GMW8 1640 aa40.42■■■■■ 4.06
CRLF1-205ENST00000597131 TDRD9Q8NDG6 1382 aaKnown RBP40.39■■■■■ 4.06
CRLF1-205ENST00000597131 TOP2BQ02880 1626 aa40.38■■■■■ 4.05
CRLF1-205ENST00000597131 WRNQ14191 1432 aaPredicted RBP eCLIP40.33■■■■■ 4.05
CRLF1-205ENST00000597131 ABCA10Q8WWZ4 1543 aa40.31■■■■■ 4.04
CRLF1-205ENST00000597131 SYNJ1O43426 1573 aa40.31■■■■■ 4.04
CRLF1-205ENST00000597131 PBRM1Q86U86 1689 aa40.31■■■■■ 4.04
CRLF1-205ENST00000597131 GRIN2BQ13224 1484 aa40.27■■■■■ 4.04
CRLF1-205ENST00000597131 SNAPC4Q5SXM2 1469 aa40.26■■■■■ 4.04
CRLF1-205ENST00000597131 ABCA5Q8WWZ7 1642 aa40.26■■■■■ 4.04
CRLF1-205ENST00000597131 MAGI1Q96QZ7 1491 aaPredicted RBP40.25■■■■■ 4.03
CRLF1-205ENST00000597131 GAPVD1Q14C86 1478 aa40.19■■■■■ 4.03
CRLF1-205ENST00000597131 RIMBP3CA6NJZ7 1639 aa40.12■■■■■ 4.01
CRLF1-205ENST00000597131 RIMBP3BA6NNM3 1639 aa40.12■■■■■ 4.01
CRLF1-205ENST00000597131 RIMBP3Q9UFD9 1639 aa40.12■■■■■ 4.01
CRLF1-205ENST00000597131 FBLN2P98095 1184 aa40.11■■■■■ 4.01
CRLF1-205ENST00000597131 SYNJ2O15056 1496 aa40.07■■■■■ 4
CRLF1-205ENST00000597131 ARHGEF11O15085 1522 aa40.03■■■■■ 4
CRLF1-205ENST00000597131 TRIM41Q8WV44 630 aa39.99■■■■□ 3.99
CRLF1-205ENST00000597131 CHMP7Q8WUX9 453 aaPredicted RBP39.97■■■■□ 3.99
CRLF1-205ENST00000597131 CLASP1Q7Z460 1538 aa39.93■■■■□ 3.98
CRLF1-205ENST00000597131 ADAMTS12P58397 1594 aa39.89■■■■□ 3.98
CRLF1-205ENST00000597131 ERICH3Q5RHP9 1530 aa39.86■■■■□ 3.97
CRLF1-205ENST00000597131 GRIN2AQ12879 1464 aa39.75■■■■□ 3.95
CRLF1-205ENST00000597131 FHAD1B1AJZ9 1412 aa39.73■■■■□ 3.95
CRLF1-205ENST00000597131 ARAP1Q96P48 1450 aa39.65■■■■□ 3.94
CRLF1-205ENST00000597131 CEP170Q5SW79 1584 aa39.59■■■■□ 3.93
CRLF1-205ENST00000597131 NUP160Q12769 1436 aa39.58■■■■□ 3.93
CRLF1-205ENST00000597131 KIF27Q86VH2 1401 aa39.54■■■■□ 3.92
CRLF1-205ENST00000597131 CYB5RLQ6IPT4 315 aa39.51■■■■□ 3.92
CRLF1-205ENST00000597131 CUL7Q14999 1698 aa39.49■■■■□ 3.91
CRLF1-205ENST00000597131 SHROOM2Q13796 1616 aa39.42■■■■□ 3.9
CRLF1-205ENST00000597131 RUSC2Q8N2Y8 1516 aa39.33■■■■□ 3.89
CRLF1-205ENST00000597131 IGF1RP08069 1367 aa39.33■■■■□ 3.89
CRLF1-205ENST00000597131 ERCC6L2Q5T890 1561 aa39.26■■■■□ 3.88
CRLF1-205ENST00000597131 CARMIL1Q5VZK9 1371 aa39.13■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms