RNA–Protein interactions for RNA: ENST00000596873.1

RPS11-203, Transcript of ribosomal protein S11, humanhuman

TSL 2 BASIC

Gene RPS11, Length 583 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-203ENST00000596873 NOLC1Q14978 699 aaKnown RBP eCLIP8.45□□□□□ -1.06not detected■■■■■ 34.5
RPS11-203ENST00000596873 DKC1O60832 514 aaKnown RBP eCLIP8.23□□□□□ -1.09not detected■■■■□ 22.8
RPS11-203ENST00000596873 ZRANB2O95218 330 aaKnown RBP eCLIP8.08□□□□□ -1.12not detected■□□□□ 10.1
RPS11-203ENST00000596873 PUM1Q14671 1186 aaKnown RBP eCLIP7.9□□□□□ -1.14not detected■■□□□ 13.2
RPS11-203ENST00000596873 YBX3P16989 372 aaKnown RBP eCLIP10.09□□□□□ -0.79not detected■□□□□ 10.1
RPS11-203ENST00000596873 PABPC4Q13310 644 aaKnown RBP eCLIP8.98□□□□□ -0.97not detected■■■□□ 17
RPS11-203ENST00000596873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05not detected■■■■■ 30.7
RPS11-203ENST00000596873 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02not detected■■□□□ 14
RPS11-203ENST00000596873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44not detected■□□□□ 9.4
RPS11-203ENST00000596873 SMNDC1O75940 238 aaKnown RBP eCLIP7.37□□□□□ -1.23not detected■■■■■ 29.5
RPS11-203ENST00000596873 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.21□□□□□ -1.26not detected■■□□□ 13.2
RPS11-203ENST00000596873 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.32not detected■□□□□ 11.3
RPS11-203ENST00000596873 NIPBLQ6KC79 2804 aaeCLIP7□□□□□ -1.29not detected■■■■■ 82.5
RPS11-203ENST00000596873 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.33□□□□□ -1.24not detected■■■■□ 25.5
RPS11-203ENST00000596873 XRCC6P12956 609 aaKnown RBP eCLIP8.79□□□□□ -1not detected■□□□□ 9.1
RPS11-203ENST00000596873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.9□□□□□ -1.3not detected■■□□□ 11.6
RPS11-203ENST00000596873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.5□□□□□ -1.05not detected■□□□□ 10.7
RPS11-203ENST00000596873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.31□□□□□ -1.24not detected■■□□□ 13.5
RPS11-203ENST00000596873 RPS3P23396 243 aaKnown RBP eCLIP7.22□□□□□ -1.25not detected■□□□□ 8.2
RPS11-203ENST00000596873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.54□□□□□ -1.2not detected■□□□□ 10.8
RPS11-203ENST00000596873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.25□□□□□ -1.09not detected■□□□□ 8
RPS11-203ENST00000596873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.12not detected■□□□□ 10.7
RPS11-203ENST00000596873 SF3B4Q15427 424 aaKnown RBP eCLIP6.69□□□□□ -1.34not detected■■■■■ 32.1
RPS11-203ENST00000596873 LARP4Q71RC2 724 aaKnown RBP eCLIP7.25□□□□□ -1.25not detected■□□□□ 10.9
RPS11-203ENST00000596873 NIP7Q9Y221 180 aaKnown RBP eCLIP9.75□□□□□ -0.85not detected■■■□□ 15.7
RPS11-203ENST00000596873 SF3A3Q12874 501 aaKnown RBP eCLIP7.52□□□□□ -1.21not detected■■■■□ 25.7
RPS11-203ENST00000596873 TIA1P31483 386 aaKnown RBP eCLIP7.04□□□□□ -1.28not detected■□□□□ 9.1
RPS11-203ENST00000596873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57not detected■■□□□ 11.5
RPS11-203ENST00000596873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.13□□□□□ -1.11not detected■■□□□ 12.5
RPS11-203ENST00000596873 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25not detected■■■■■ 69
RPS11-203ENST00000596873 EIF3GO75821 320 aaKnown RBP eCLIP6.05□□□□□ -1.44not detected■■■□□ 15.9
RPS11-203ENST00000596873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.36not detected■■■□□ 16.1
RPS11-203ENST00000596873 AATFQ9NY61 560 aaKnown RBP eCLIP9.04□□□□□ -0.96not detected■■■■■ 44.5
RPS11-203ENST00000596873 RBM15Q96T37 977 aaKnown RBP eCLIP7.68□□□□□ -1.18not detected■□□□□ 10.4
RPS11-203ENST00000596873 RBFOX2O43251 390 aaKnown RBP eCLIP6.12□□□□□ -1.43not detected■■■□□ 18.3
RPS11-203ENST00000596873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.8□□□□□ -1.16not detected■■■■■ 298.1
RPS11-203ENST00000596873 EFTUD2Q15029 972 aaKnown RBP eCLIP7.52□□□□□ -1.21not detected■■■■■ 63.6
RPS11-203ENST00000596873 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.67□□□□□ -1.02not detected■■□□□ 12.6
RPS11-203ENST00000596873 AGGF1Q8N302 714 aaeCLIP7.59□□□□□ -1.19not detected■■■□□ 18.8
RPS11-203ENST00000596873 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93not detected■■■■□ 23.6
RPS11-203ENST00000596873 RBM5P52756 815 aaKnown RBP eCLIP9.26□□□□□ -0.93not detected■■■■□ 20.7
Retrieved 41 of 41 RNA–protein pairs in 6.8 ms