RNA–Protein interactions for RNA: ENST00000595831.5

TIMM44-203, Transcript of translocase of inner mitochondrial membrane 44, humanhuman

TSL 5

Gene TIMM44, Length 1,797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM44-203ENST00000595831 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■■■ 74
TIMM44-203ENST00000595831 SRSF1Q07955 248 aaKnown RBP eCLIP12.42□□□□□ -0.425e-19■■■■■ 67.9
TIMM44-203ENST00000595831 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.16■□□□□ 0.186e-6■■■■■ 48.1
TIMM44-203ENST00000595831 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.541e-13■■■■■ 36.1
TIMM44-203ENST00000595831 SF3A3Q12874 501 aaKnown RBP eCLIP15.51■□□□□ 0.077e-9■■■■■ 35.1
TIMM44-203ENST00000595831 DDX3XO00571 662 aaKnown RBP eCLIP16.46■□□□□ 0.239e-7■■■■■ 30.5
TIMM44-203ENST00000595831 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■■■■ 29.7
TIMM44-203ENST00000595831 SF3B4Q15427 424 aaKnown RBP eCLIP13.53□□□□□ -0.249e-7■■■■■ 28.6
TIMM44-203ENST00000595831 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.17■□□□□ 0.027e-6■■■■■ 27.5
TIMM44-203ENST00000595831 EFTUD2Q15029 972 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■■■■□ 26.6
TIMM44-203ENST00000595831 RBM15Q96T37 977 aaKnown RBP eCLIP15.95■□□□□ 0.141e-6■■■■□ 25.7
TIMM44-203ENST00000595831 PCBP1Q15365 356 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■□ 24.4
TIMM44-203ENST00000595831 TIAL1Q01085 375 aaKnown RBP eCLIP15.12■□□□□ 0.013e-7■■■■□ 24.2
TIMM44-203ENST00000595831 RBM22Q9NW64 420 aaKnown RBP eCLIP15.44■□□□□ 0.064e-8■■■■□ 23.6
TIMM44-203ENST00000595831 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.358e-7■■■■□ 23.2
TIMM44-203ENST00000595831 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.344e-6■■■■□ 23.2
TIMM44-203ENST00000595831 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■■■■□ 21.1
TIMM44-203ENST00000595831 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.35e-7■■■■□ 19.8
TIMM44-203ENST00000595831 DDX6P26196 483 aaKnown RBP eCLIP15.08■□□□□ 06e-6■■■■□ 19.3
TIMM44-203ENST00000595831 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.04■□□□□ 0.486e-7■■■□□ 18.2
TIMM44-203ENST00000595831 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.332e-8■■■□□ 17.5
TIMM44-203ENST00000595831 U2AF2P26368 475 aaKnown RBP eCLIP17.63■□□□□ 0.411e-7■■■□□ 17.4
TIMM44-203ENST00000595831 PUM1Q14671 1186 aaKnown RBP eCLIP14.36□□□□□ -0.115e-6■■■□□ 16.5
TIMM44-203ENST00000595831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.943e-7■■■□□ 15.7
TIMM44-203ENST00000595831 HNRNPKP61978 463 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■□□□ 14.5
TIMM44-203ENST00000595831 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.224e-7■■□□□ 14.2
TIMM44-203ENST00000595831 RBFOX2O43251 390 aaKnown RBP eCLIP12.7□□□□□ -0.385e-6■■□□□ 13.9
TIMM44-203ENST00000595831 PPIGQ13427 754 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■■□□□ 13.2
TIMM44-203ENST00000595831 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■□□□ 12.3
TIMM44-203ENST00000595831 TIA1P31483 386 aaKnown RBP eCLIP14.67□□□□□ -0.061e-7■■□□□ 12.1
TIMM44-203ENST00000595831 NOLC1Q14978 699 aaKnown RBP eCLIP17.47■□□□□ 0.395e-10■■□□□ 12.1
TIMM44-203ENST00000595831 YBX3P16989 372 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■□□□ 11.9
TIMM44-203ENST00000595831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■□□□ 11.7
TIMM44-203ENST00000595831 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.97□□□□□ -0.174e-10■□□□□ 10.3
TIMM44-203ENST00000595831 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.835e-6■□□□□ 10.2
TIMM44-203ENST00000595831 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■□□□□ 10.1
TIMM44-203ENST00000595831 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.362e-6■□□□□ 9.8
TIMM44-203ENST00000595831 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.372e-8■□□□□ 9.6
TIMM44-203ENST00000595831 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.751e-8■□□□□ 9.3
Retrieved 39 of 39 RNA–protein pairs in 18.5 ms