RNA–Protein interactions for RNA: ENST00000595368.5

SUPT5H-208, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-208ENST00000595368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■■■■■ 136
SUPT5H-208ENST00000595368 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.417e-11■■■■■ 47.6
SUPT5H-208ENST00000595368 TRA2AQ13595 282 aaKnown RBP eCLIP15.66■□□□□ 0.15e-9■■■■■ 36
SUPT5H-208ENST00000595368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.261e-7■■■■■ 30
SUPT5H-208ENST00000595368 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■■■■□ 22.4
SUPT5H-208ENST00000595368 ZNF622Q969S3 477 aaKnown RBP eCLIP20.85■□□□□ 0.935e-11■■■□□ 18
SUPT5H-208ENST00000595368 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■■■□□ 15.5
SUPT5H-208ENST00000595368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.61■■□□□ 1.052e-7■■■□□ 15.5
SUPT5H-208ENST00000595368 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.422e-11■■■□□ 15.1
SUPT5H-208ENST00000595368 SRSF1Q07955 248 aaKnown RBP eCLIP15.04■□□□□ -02e-8■■■□□ 14.6
SUPT5H-208ENST00000595368 HNRNPKP61978 463 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■□□□ 12.9
SUPT5H-208ENST00000595368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.54■■□□□ 1.527e-15■■□□□ 12.9
SUPT5H-208ENST00000595368 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■□□□ 12.7
SUPT5H-208ENST00000595368 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.531e-9■■□□□ 11.4
SUPT5H-208ENST00000595368 HLTFQ14527 1009 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■□□□□ 10.2
SUPT5H-208ENST00000595368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.244e-9■□□□□ 10.1
SUPT5H-208ENST00000595368 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.125e-11■□□□□ 10
SUPT5H-208ENST00000595368 PUM1Q14671 1186 aaKnown RBP eCLIP16.68■□□□□ 0.265e-23■□□□□ 9.9
SUPT5H-208ENST00000595368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.79■■□□□ 1.725e-6■□□□□ 9.5
SUPT5H-208ENST00000595368 GPKOWQ92917 476 aaPredicted RBP eCLIP18.29■□□□□ 0.521e-11■□□□□ 9.1
SUPT5H-208ENST00000595368 RBM15Q96T37 977 aaKnown RBP eCLIP15.88■□□□□ 0.131e-7■□□□□ 8.6
SUPT5H-208ENST00000595368 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.99■□□□□ 0.635e-6■□□□□ 8.4
SUPT5H-208ENST00000595368 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.23■□□□□ 0.671e-11■□□□□ 8.4
SUPT5H-208ENST00000595368 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.79□□□□□ -0.041e-9■□□□□ 8.3
Retrieved 24 of 24 RNA–protein pairs in 24.8 ms