RNA–Protein interactions for RNA: ENST00000595071.5

TRPM4-204, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 2,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-204ENST00000595071 NISCHQ9Y2I1 1504 aa40.74■■■■■ 4.11
TRPM4-204ENST00000595071 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
TRPM4-204ENST00000595071 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
TRPM4-204ENST00000595071 ZCCHC6Q5VYS8 1495 aaKnown RBP34.35■■■■□ 3.09
TRPM4-204ENST00000595071 DCAF8L2P0C7V8 631 aa34.3■■■■□ 3.08
TRPM4-204ENST00000595071 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
TRPM4-204ENST00000595071 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
TRPM4-204ENST00000595071 ABCC9O60706 1549 aa32.77■■■□□ 2.84
TRPM4-204ENST00000595071 SCRIBQ14160 1630 aa32.68■■■□□ 2.82
TRPM4-204ENST00000595071 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
TRPM4-204ENST00000595071 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
TRPM4-204ENST00000595071 NACADO15069 1562 aa32.26■■■□□ 2.75
TRPM4-204ENST00000595071 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
TRPM4-204ENST00000595071 CECR2Q9BXF3 1484 aa31.88■■■□□ 2.69
TRPM4-204ENST00000595071 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
TRPM4-204ENST00000595071 LOC105371045A0A1W2PR82 267 aa31.72■■■□□ 2.67
TRPM4-204ENST00000595071 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.66
TRPM4-204ENST00000595071 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
TRPM4-204ENST00000595071 WIZO95785 1651 aa31.51■■■□□ 2.64
TRPM4-204ENST00000595071 FAM9AQ8IZU1 332 aaPredicted RBP31.38■■■□□ 2.61
TRPM4-204ENST00000595071 PABPN1Q86U42 306 aaKnown RBP eCLIP31.34■■■□□ 2.61
TRPM4-204ENST00000595071 BAZ1AQ9NRL2 1556 aaPredicted RBP31.33■■■□□ 2.61
TRPM4-204ENST00000595071 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
TRPM4-204ENST00000595071 PCGF6Q9BYE7 350 aa31.31■■■□□ 2.6
TRPM4-204ENST00000595071 EHMT2Q96KQ7 1210 aa31.24■■■□□ 2.59
TRPM4-204ENST00000595071 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
TRPM4-204ENST00000595071 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
TRPM4-204ENST00000595071 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
TRPM4-204ENST00000595071 HRCP23327 699 aa30.89■■■□□ 2.54
TRPM4-204ENST00000595071 CCDC88BA6NC98 1476 aa30.87■■■□□ 2.53
TRPM4-204ENST00000595071 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
TRPM4-204ENST00000595071 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
TRPM4-204ENST00000595071 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
TRPM4-204ENST00000595071 TRIM26Q12899 539 aaPredicted RBP30.7■■■□□ 2.5
TRPM4-204ENST00000595071 PPARGC1BQ86YN6 1023 aaKnown RBP30.45■■■□□ 2.47
TRPM4-204ENST00000595071 ATAD2BQ9ULI0 1458 aa30.43■■■□□ 2.46
TRPM4-204ENST00000595071 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
TRPM4-204ENST00000595071 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
TRPM4-204ENST00000595071 SOGA1O94964 1423 aa30.36■■■□□ 2.45
TRPM4-204ENST00000595071 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
TRPM4-204ENST00000595071 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
TRPM4-204ENST00000595071 CSRNP3Q8WYN3 585 aa30.18■■■□□ 2.42
TRPM4-204ENST00000595071 UBTFP17480 764 aaKnown RBP30.16■■■□□ 2.42
TRPM4-204ENST00000595071 TTBK1Q5TCY1 1321 aaPredicted RBP30.11■■■□□ 2.41
TRPM4-204ENST00000595071 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
TRPM4-204ENST00000595071 EEA1Q15075 1411 aa30.03■■■□□ 2.4
TRPM4-204ENST00000595071 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
TRPM4-204ENST00000595071 TNIKQ9UKE5 1360 aa29.94■■■□□ 2.38
TRPM4-204ENST00000595071 GOLGA3Q08378 1498 aa29.88■■■□□ 2.37
TRPM4-204ENST00000595071 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
TRPM4-204ENST00000595071 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
TRPM4-204ENST00000595071 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
TRPM4-204ENST00000595071 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
TRPM4-204ENST00000595071 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
TRPM4-204ENST00000595071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.68■■■□□ 2.34
TRPM4-204ENST00000595071 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
TRPM4-204ENST00000595071 RAPGEF2Q9Y4G8 1499 aa29.62■■■□□ 2.33
TRPM4-204ENST00000595071 KIF21BO75037 1637 aa29.61■■■□□ 2.33
TRPM4-204ENST00000595071 CCER1Q8TC90 406 aaPredicted RBP29.58■■■□□ 2.33
TRPM4-204ENST00000595071 CLIP1P30622 1438 aa29.57■■■□□ 2.32
TRPM4-204ENST00000595071 CFTRP13569 1480 aa29.54■■■□□ 2.32
TRPM4-204ENST00000595071 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
TRPM4-204ENST00000595071 CUX1P39880 1505 aa29.52■■■□□ 2.32
TRPM4-204ENST00000595071 APLP2Q06481 763 aa29.4■■■□□ 2.3
TRPM4-204ENST00000595071 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
TRPM4-204ENST00000595071 KIF27Q86VH2 1401 aa29.34■■■□□ 2.29
TRPM4-204ENST00000595071 CADPSQ9ULU8 1353 aa29.34■■■□□ 2.29
TRPM4-204ENST00000595071 VPS8Q8N3P4 1428 aa29.33■■■□□ 2.29
TRPM4-204ENST00000595071 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
TRPM4-204ENST00000595071 HNRNPUL2Q1KMD3 747 aaKnown RBP29.27■■■□□ 2.28
TRPM4-204ENST00000595071 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
TRPM4-204ENST00000595071 CUX2O14529 1486 aa29.19■■■□□ 2.26
TRPM4-204ENST00000595071 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
TRPM4-204ENST00000595071 FGD5Q6ZNL6 1462 aa29.11■■■□□ 2.25
TRPM4-204ENST00000595071 FANCD2Q9BXW9 1451 aa29.08■■■□□ 2.25
TRPM4-204ENST00000595071 ARAP1Q96P48 1450 aa29.06■■■□□ 2.24
TRPM4-204ENST00000595071 NESP48681 1621 aa29.05■■■□□ 2.24
TRPM4-204ENST00000595071 IGF1RP08069 1367 aa29.03■■■□□ 2.24
TRPM4-204ENST00000595071 KANK4Q5T7N3 995 aaPredicted RBP28.97■■■□□ 2.23
TRPM4-204ENST00000595071 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
TRPM4-204ENST00000595071 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
TRPM4-204ENST00000595071 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
TRPM4-204ENST00000595071 ARHGAP35Q9NRY4 1499 aa28.9■■■□□ 2.22
TRPM4-204ENST00000595071 P3H3Q8IVL6 736 aa28.83■■■□□ 2.21
TRPM4-204ENST00000595071 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
TRPM4-204ENST00000595071 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
TRPM4-204ENST00000595071 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
TRPM4-204ENST00000595071 ATP1B4Q9UN42 357 aaPredicted RBP28.76■■■□□ 2.19
TRPM4-204ENST00000595071 ITGAEP38570 1179 aa28.73■■■□□ 2.19
TRPM4-204ENST00000595071 DIEXFQ68CQ4 756 aaKnown RBP28.7■■■□□ 2.18
TRPM4-204ENST00000595071 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
TRPM4-204ENST00000595071 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
TRPM4-204ENST00000595071 URB2Q14146 1524 aaKnown RBP28.65■■■□□ 2.18
TRPM4-204ENST00000595071 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
TRPM4-204ENST00000595071 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
TRPM4-204ENST00000595071 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
TRPM4-204ENST00000595071 ZNF316A6NFI3 1004 aaPredicted RBP28.55■■■□□ 2.16
TRPM4-204ENST00000595071 FHOD3Q2V2M9 1422 aa28.54■■■□□ 2.16
TRPM4-204ENST00000595071 RRBP1Q9P2E9 1410 aaKnown RBP28.53■■■□□ 2.16
TRPM4-204ENST00000595071 TIAM1Q13009 1591 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms