RNA–Protein interactions for RNA: ENST00000594507.5

SMIM7-212, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-212ENST00000594507 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
SMIM7-212ENST00000594507 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
SMIM7-212ENST00000594507 ABCC9O60706 1549 aa17.01■□□□□ 0.31
SMIM7-212ENST00000594507 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
SMIM7-212ENST00000594507 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
SMIM7-212ENST00000594507 NACADO15069 1562 aa16.26■□□□□ 0.19
SMIM7-212ENST00000594507 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
SMIM7-212ENST00000594507 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
SMIM7-212ENST00000594507 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
SMIM7-212ENST00000594507 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
SMIM7-212ENST00000594507 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
SMIM7-212ENST00000594507 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMIM7-212ENST00000594507 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
SMIM7-212ENST00000594507 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.08
SMIM7-212ENST00000594507 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
SMIM7-212ENST00000594507 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
SMIM7-212ENST00000594507 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
SMIM7-212ENST00000594507 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
SMIM7-212ENST00000594507 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
SMIM7-212ENST00000594507 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
SMIM7-212ENST00000594507 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
SMIM7-212ENST00000594507 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
SMIM7-212ENST00000594507 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
SMIM7-212ENST00000594507 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
SMIM7-212ENST00000594507 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
SMIM7-212ENST00000594507 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
SMIM7-212ENST00000594507 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
SMIM7-212ENST00000594507 WIZO95785 1651 aa14.9□□□□□ -0.02
SMIM7-212ENST00000594507 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
SMIM7-212ENST00000594507 NESP48681 1621 aa14.71□□□□□ -0.05
SMIM7-212ENST00000594507 TOP2AP11388 1531 aaKnown RBP14.69□□□□□ -0.06
SMIM7-212ENST00000594507 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
SMIM7-212ENST00000594507 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
SMIM7-212ENST00000594507 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
SMIM7-212ENST00000594507 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
SMIM7-212ENST00000594507 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
SMIM7-212ENST00000594507 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
SMIM7-212ENST00000594507 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
SMIM7-212ENST00000594507 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
SMIM7-212ENST00000594507 PRDM2Q13029 1718 aa14.46□□□□□ -0.1
SMIM7-212ENST00000594507 CUX2O14529 1486 aa14.45□□□□□ -0.1
SMIM7-212ENST00000594507 CFTRP13569 1480 aa14.45□□□□□ -0.1
SMIM7-212ENST00000594507 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
SMIM7-212ENST00000594507 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
SMIM7-212ENST00000594507 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
SMIM7-212ENST00000594507 WDR62O43379 1518 aa14.35□□□□□ -0.11
SMIM7-212ENST00000594507 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
SMIM7-212ENST00000594507 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
SMIM7-212ENST00000594507 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
SMIM7-212ENST00000594507 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
SMIM7-212ENST00000594507 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
SMIM7-212ENST00000594507 CUX1P39880 1505 aa14.09□□□□□ -0.15
SMIM7-212ENST00000594507 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
SMIM7-212ENST00000594507 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
SMIM7-212ENST00000594507 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
SMIM7-212ENST00000594507 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
SMIM7-212ENST00000594507 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
SMIM7-212ENST00000594507 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
SMIM7-212ENST00000594507 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
SMIM7-212ENST00000594507 SOGA1O94964 1423 aa14□□□□□ -0.17
SMIM7-212ENST00000594507 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
SMIM7-212ENST00000594507 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
SMIM7-212ENST00000594507 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
SMIM7-212ENST00000594507 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMIM7-212ENST00000594507 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
SMIM7-212ENST00000594507 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
SMIM7-212ENST00000594507 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
SMIM7-212ENST00000594507 CHD1O14646 1710 aa13.9□□□□□ -0.18
SMIM7-212ENST00000594507 PBRM1Q86U86 1689 aa13.9□□□□□ -0.18
SMIM7-212ENST00000594507 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
SMIM7-212ENST00000594507 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
SMIM7-212ENST00000594507 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
SMIM7-212ENST00000594507 FBLN2P98095 1184 aa13.84□□□□□ -0.19
SMIM7-212ENST00000594507 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
SMIM7-212ENST00000594507 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
SMIM7-212ENST00000594507 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
SMIM7-212ENST00000594507 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
SMIM7-212ENST00000594507 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
SMIM7-212ENST00000594507 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
SMIM7-212ENST00000594507 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
SMIM7-212ENST00000594507 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
SMIM7-212ENST00000594507 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.22
SMIM7-212ENST00000594507 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.22
SMIM7-212ENST00000594507 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.22
SMIM7-212ENST00000594507 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
SMIM7-212ENST00000594507 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
SMIM7-212ENST00000594507 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
SMIM7-212ENST00000594507 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
SMIM7-212ENST00000594507 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
SMIM7-212ENST00000594507 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
SMIM7-212ENST00000594507 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
SMIM7-212ENST00000594507 CUL7Q14999 1698 aa13.63□□□□□ -0.23
SMIM7-212ENST00000594507 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
SMIM7-212ENST00000594507 IGF1RP08069 1367 aa13.58□□□□□ -0.23
SMIM7-212ENST00000594507 NUP160Q12769 1436 aa13.58□□□□□ -0.24
SMIM7-212ENST00000594507 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
SMIM7-212ENST00000594507 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
SMIM7-212ENST00000594507 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
SMIM7-212ENST00000594507 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
SMIM7-212ENST00000594507 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms