RNA–Protein interactions for RNA: ENST00000592874.1

U2AF2-208, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 5

Gene U2AF2, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-208ENST00000592874 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
U2AF2-208ENST00000592874 ABCC9O60706 1549 aa38.48■■■■□ 3.75
U2AF2-208ENST00000592874 CCDC180Q9P1Z9 1646 aa38.05■■■■□ 3.68
U2AF2-208ENST00000592874 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
U2AF2-208ENST00000592874 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
U2AF2-208ENST00000592874 NACADO15069 1562 aa36.06■■■■□ 3.36
U2AF2-208ENST00000592874 DCAF8L2P0C7V8 631 aa35.83■■■■□ 3.33
U2AF2-208ENST00000592874 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.322e-8■□□□□ 9.7
U2AF2-208ENST00000592874 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
U2AF2-208ENST00000592874 MYO15BQ96JP2 1530 aa35.46■■■■□ 3.27
U2AF2-208ENST00000592874 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
U2AF2-208ENST00000592874 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
U2AF2-208ENST00000592874 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
U2AF2-208ENST00000592874 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
U2AF2-208ENST00000592874 SCRIBQ14160 1630 aa34.72■■■■□ 3.15
U2AF2-208ENST00000592874 CC2D2AQ9P2K1 1620 aa34.7■■■■□ 3.15
U2AF2-208ENST00000592874 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
U2AF2-208ENST00000592874 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
U2AF2-208ENST00000592874 DNAJC5Q9H3Z4 198 aa33.65■■■□□ 2.98
U2AF2-208ENST00000592874 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
U2AF2-208ENST00000592874 CUX2O14529 1486 aa33.25■■■□□ 2.91
U2AF2-208ENST00000592874 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
U2AF2-208ENST00000592874 ATAD2BQ9ULI0 1458 aa33.19■■■□□ 2.9
U2AF2-208ENST00000592874 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
U2AF2-208ENST00000592874 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
U2AF2-208ENST00000592874 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
U2AF2-208ENST00000592874 NESP48681 1621 aa32.98■■■□□ 2.87
U2AF2-208ENST00000592874 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
U2AF2-208ENST00000592874 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
U2AF2-208ENST00000592874 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
U2AF2-208ENST00000592874 THOC2Q8NI27 1593 aaKnown RBP32.67■■■□□ 2.82
U2AF2-208ENST00000592874 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
U2AF2-208ENST00000592874 LAMC3Q9Y6N6 1575 aa32.6■■■□□ 2.81
U2AF2-208ENST00000592874 KIF21AQ7Z4S6 1674 aa32.46■■■□□ 2.79
U2AF2-208ENST00000592874 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
U2AF2-208ENST00000592874 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
U2AF2-208ENST00000592874 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
U2AF2-208ENST00000592874 WIZO95785 1651 aa32.18■■■□□ 2.74
U2AF2-208ENST00000592874 WDR62O43379 1518 aa32.15■■■□□ 2.74
U2AF2-208ENST00000592874 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
U2AF2-208ENST00000592874 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
U2AF2-208ENST00000592874 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
U2AF2-208ENST00000592874 CFTRP13569 1480 aa31.87■■■□□ 2.69
U2AF2-208ENST00000592874 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
U2AF2-208ENST00000592874 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
U2AF2-208ENST00000592874 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
U2AF2-208ENST00000592874 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
U2AF2-208ENST00000592874 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
U2AF2-208ENST00000592874 ZNF608Q9ULD9 1512 aaPredicted RBP31.41■■■□□ 2.62
U2AF2-208ENST00000592874 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
U2AF2-208ENST00000592874 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
U2AF2-208ENST00000592874 RIMBP3CA6NJZ7 1639 aa31.32■■■□□ 2.6
U2AF2-208ENST00000592874 RIMBP3BA6NNM3 1639 aa31.32■■■□□ 2.6
U2AF2-208ENST00000592874 RIMBP3Q9UFD9 1639 aa31.32■■■□□ 2.6
U2AF2-208ENST00000592874 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
U2AF2-208ENST00000592874 ARHGEF11O15085 1522 aa31.2■■■□□ 2.59
U2AF2-208ENST00000592874 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
U2AF2-208ENST00000592874 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
U2AF2-208ENST00000592874 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
U2AF2-208ENST00000592874 AQRO60306 1485 aaKnown RBP eCLIP31.07■■■□□ 2.564e-11■■■■■ 35
U2AF2-208ENST00000592874 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
U2AF2-208ENST00000592874 CHD1O14646 1710 aa30.98■■■□□ 2.55
U2AF2-208ENST00000592874 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
U2AF2-208ENST00000592874 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
U2AF2-208ENST00000592874 FBLN2P98095 1184 aa30.9■■■□□ 2.54
U2AF2-208ENST00000592874 ARAP1Q96P48 1450 aa30.89■■■□□ 2.54
U2AF2-208ENST00000592874 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.53
U2AF2-208ENST00000592874 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
U2AF2-208ENST00000592874 SOGA1O94964 1423 aa30.8■■■□□ 2.52
U2AF2-208ENST00000592874 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
U2AF2-208ENST00000592874 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
U2AF2-208ENST00000592874 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
U2AF2-208ENST00000592874 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
U2AF2-208ENST00000592874 CUX1P39880 1505 aa30.66■■■□□ 2.5
U2AF2-208ENST00000592874 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
U2AF2-208ENST00000592874 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
U2AF2-208ENST00000592874 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
U2AF2-208ENST00000592874 GRIN2BQ13224 1484 aa30.57■■■□□ 2.48
U2AF2-208ENST00000592874 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
U2AF2-208ENST00000592874 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
U2AF2-208ENST00000592874 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
U2AF2-208ENST00000592874 PBRM1Q86U86 1689 aa30.39■■■□□ 2.46
U2AF2-208ENST00000592874 ABCA10Q8WWZ4 1543 aa30.34■■■□□ 2.45
U2AF2-208ENST00000592874 ABCA5Q8WWZ7 1642 aa30.33■■■□□ 2.45
U2AF2-208ENST00000592874 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.43
U2AF2-208ENST00000592874 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
U2AF2-208ENST00000592874 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
U2AF2-208ENST00000592874 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.42
U2AF2-208ENST00000592874 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
U2AF2-208ENST00000592874 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
U2AF2-208ENST00000592874 NUP160Q12769 1436 aa30.12■■■□□ 2.41
U2AF2-208ENST00000592874 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
U2AF2-208ENST00000592874 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
U2AF2-208ENST00000592874 BIVM-ERCC5R4GMW8 1640 aa30.02■■■□□ 2.4
U2AF2-208ENST00000592874 FHAD1B1AJZ9 1412 aa30.02■■■□□ 2.4
U2AF2-208ENST00000592874 SHROOM2Q13796 1616 aa30■■■□□ 2.39
U2AF2-208ENST00000592874 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
U2AF2-208ENST00000592874 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
U2AF2-208ENST00000592874 JPH4Q96JJ6 628 aa29.77■■■□□ 2.36
U2AF2-208ENST00000592874 KIF13AQ9H1H9 1805 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms