RNA–Protein interactions for RNA: ENST00000592694.5

YIF1B-216, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene YIF1B, Length 1,181 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-216ENST00000592694 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
YIF1B-216ENST00000592694 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
YIF1B-216ENST00000592694 ABCC9O60706 1549 aa32.6■■■□□ 2.81
YIF1B-216ENST00000592694 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
YIF1B-216ENST00000592694 RB1CC1Q8TDY2 1594 aa31.07■■■□□ 2.56
YIF1B-216ENST00000592694 NACADO15069 1562 aa30.99■■■□□ 2.55
YIF1B-216ENST00000592694 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
YIF1B-216ENST00000592694 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.53
YIF1B-216ENST00000592694 MYO15BQ96JP2 1530 aa30.73■■■□□ 2.51
YIF1B-216ENST00000592694 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
YIF1B-216ENST00000592694 UNC13AQ9UPW8 1703 aa30.57■■■□□ 2.48
YIF1B-216ENST00000592694 BICRAQ9NZM4 1560 aa30.19■■■□□ 2.42
YIF1B-216ENST00000592694 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
YIF1B-216ENST00000592694 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
YIF1B-216ENST00000592694 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
YIF1B-216ENST00000592694 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
YIF1B-216ENST00000592694 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
YIF1B-216ENST00000592694 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
YIF1B-216ENST00000592694 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
YIF1B-216ENST00000592694 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
YIF1B-216ENST00000592694 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
YIF1B-216ENST00000592694 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
YIF1B-216ENST00000592694 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
YIF1B-216ENST00000592694 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
YIF1B-216ENST00000592694 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
YIF1B-216ENST00000592694 CUX2O14529 1486 aa28.5■■■□□ 2.15
YIF1B-216ENST00000592694 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
YIF1B-216ENST00000592694 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
YIF1B-216ENST00000592694 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
YIF1B-216ENST00000592694 WIZO95785 1651 aa28.3■■■□□ 2.12
YIF1B-216ENST00000592694 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
YIF1B-216ENST00000592694 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
YIF1B-216ENST00000592694 NESP48681 1621 aa28■■■□□ 2.07
YIF1B-216ENST00000592694 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
YIF1B-216ENST00000592694 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
YIF1B-216ENST00000592694 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
YIF1B-216ENST00000592694 KIF21AQ7Z4S6 1674 aa27.76■■■□□ 2.03
YIF1B-216ENST00000592694 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.02
YIF1B-216ENST00000592694 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
YIF1B-216ENST00000592694 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
YIF1B-216ENST00000592694 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
YIF1B-216ENST00000592694 CFTRP13569 1480 aa27.55■■■□□ 2
YIF1B-216ENST00000592694 PRDM2Q13029 1718 aa27.55■■■□□ 2
YIF1B-216ENST00000592694 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
YIF1B-216ENST00000592694 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
YIF1B-216ENST00000592694 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
YIF1B-216ENST00000592694 WDR62O43379 1518 aa27.36■■□□□ 1.97
YIF1B-216ENST00000592694 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
YIF1B-216ENST00000592694 URB2Q14146 1524 aaKnown RBP27.2■■□□□ 1.94
YIF1B-216ENST00000592694 TOPBP1Q92547 1522 aa27■■□□□ 1.91
YIF1B-216ENST00000592694 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
YIF1B-216ENST00000592694 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
YIF1B-216ENST00000592694 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
YIF1B-216ENST00000592694 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
YIF1B-216ENST00000592694 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
YIF1B-216ENST00000592694 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
YIF1B-216ENST00000592694 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
YIF1B-216ENST00000592694 CUX1P39880 1505 aa26.79■■□□□ 1.88
YIF1B-216ENST00000592694 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
YIF1B-216ENST00000592694 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
YIF1B-216ENST00000592694 ZNF608Q9ULD9 1512 aaPredicted RBP26.76■■□□□ 1.87
YIF1B-216ENST00000592694 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
YIF1B-216ENST00000592694 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
YIF1B-216ENST00000592694 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
YIF1B-216ENST00000592694 ARHGEF11O15085 1522 aa26.62■■□□□ 1.85
YIF1B-216ENST00000592694 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
YIF1B-216ENST00000592694 SOGA1O94964 1423 aa26.59■■□□□ 1.85
YIF1B-216ENST00000592694 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
YIF1B-216ENST00000592694 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.844e-7■■■■□ 19.6
YIF1B-216ENST00000592694 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
YIF1B-216ENST00000592694 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
YIF1B-216ENST00000592694 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
YIF1B-216ENST00000592694 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
YIF1B-216ENST00000592694 CHD1O14646 1710 aa26.47■■□□□ 1.83
YIF1B-216ENST00000592694 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
YIF1B-216ENST00000592694 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
YIF1B-216ENST00000592694 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
YIF1B-216ENST00000592694 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
YIF1B-216ENST00000592694 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
YIF1B-216ENST00000592694 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
YIF1B-216ENST00000592694 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
YIF1B-216ENST00000592694 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
YIF1B-216ENST00000592694 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
YIF1B-216ENST00000592694 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
YIF1B-216ENST00000592694 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
YIF1B-216ENST00000592694 FBLN2P98095 1184 aa26.21■■□□□ 1.79
YIF1B-216ENST00000592694 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
YIF1B-216ENST00000592694 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
YIF1B-216ENST00000592694 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
YIF1B-216ENST00000592694 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
YIF1B-216ENST00000592694 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
YIF1B-216ENST00000592694 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
YIF1B-216ENST00000592694 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
YIF1B-216ENST00000592694 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
YIF1B-216ENST00000592694 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
YIF1B-216ENST00000592694 CUL7Q14999 1698 aa25.9■■□□□ 1.74
YIF1B-216ENST00000592694 NUP160Q12769 1436 aa25.88■■□□□ 1.73
YIF1B-216ENST00000592694 IGF1RP08069 1367 aa25.83■■□□□ 1.73
YIF1B-216ENST00000592694 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
YIF1B-216ENST00000592694 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms