RNA–Protein interactions for RNA: ENST00000592518.1

AF038458.3-201, humanhuman

TSL 3 BASIC

Gene AF038458.3, Length 500 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF038458.3-201ENST00000592518 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
AF038458.3-201ENST00000592518 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
AF038458.3-201ENST00000592518 ABCC9O60706 1549 aa19.35■□□□□ 0.69
AF038458.3-201ENST00000592518 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
AF038458.3-201ENST00000592518 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
AF038458.3-201ENST00000592518 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
AF038458.3-201ENST00000592518 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
AF038458.3-201ENST00000592518 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
AF038458.3-201ENST00000592518 NACADO15069 1562 aa18.38■□□□□ 0.53
AF038458.3-201ENST00000592518 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
AF038458.3-201ENST00000592518 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
AF038458.3-201ENST00000592518 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
AF038458.3-201ENST00000592518 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
AF038458.3-201ENST00000592518 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
AF038458.3-201ENST00000592518 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
AF038458.3-201ENST00000592518 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
AF038458.3-201ENST00000592518 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
AF038458.3-201ENST00000592518 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
AF038458.3-201ENST00000592518 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
AF038458.3-201ENST00000592518 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
AF038458.3-201ENST00000592518 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
AF038458.3-201ENST00000592518 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
AF038458.3-201ENST00000592518 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
AF038458.3-201ENST00000592518 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
AF038458.3-201ENST00000592518 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
AF038458.3-201ENST00000592518 CUX2O14529 1486 aa16.99■□□□□ 0.31
AF038458.3-201ENST00000592518 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
AF038458.3-201ENST00000592518 WIZO95785 1651 aa16.97■□□□□ 0.31
AF038458.3-201ENST00000592518 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
AF038458.3-201ENST00000592518 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
AF038458.3-201ENST00000592518 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
AF038458.3-201ENST00000592518 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
AF038458.3-201ENST00000592518 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
AF038458.3-201ENST00000592518 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
AF038458.3-201ENST00000592518 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
AF038458.3-201ENST00000592518 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
AF038458.3-201ENST00000592518 NESP48681 1621 aa16.46■□□□□ 0.23
AF038458.3-201ENST00000592518 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
AF038458.3-201ENST00000592518 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
AF038458.3-201ENST00000592518 CFTRP13569 1480 aa16.43■□□□□ 0.22
AF038458.3-201ENST00000592518 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
AF038458.3-201ENST00000592518 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
AF038458.3-201ENST00000592518 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
AF038458.3-201ENST00000592518 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
AF038458.3-201ENST00000592518 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
AF038458.3-201ENST00000592518 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
AF038458.3-201ENST00000592518 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
AF038458.3-201ENST00000592518 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
AF038458.3-201ENST00000592518 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
AF038458.3-201ENST00000592518 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
AF038458.3-201ENST00000592518 WDR62O43379 1518 aa16.09■□□□□ 0.17
AF038458.3-201ENST00000592518 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
AF038458.3-201ENST00000592518 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
AF038458.3-201ENST00000592518 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
AF038458.3-201ENST00000592518 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
AF038458.3-201ENST00000592518 CUX1P39880 1505 aa16.05■□□□□ 0.16
AF038458.3-201ENST00000592518 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
AF038458.3-201ENST00000592518 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
AF038458.3-201ENST00000592518 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
AF038458.3-201ENST00000592518 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
AF038458.3-201ENST00000592518 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
AF038458.3-201ENST00000592518 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
AF038458.3-201ENST00000592518 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
AF038458.3-201ENST00000592518 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
AF038458.3-201ENST00000592518 SOGA1O94964 1423 aa15.88■□□□□ 0.13
AF038458.3-201ENST00000592518 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
AF038458.3-201ENST00000592518 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
AF038458.3-201ENST00000592518 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
AF038458.3-201ENST00000592518 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
AF038458.3-201ENST00000592518 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
AF038458.3-201ENST00000592518 EEA1Q15075 1411 aa15.82■□□□□ 0.12
AF038458.3-201ENST00000592518 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
AF038458.3-201ENST00000592518 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
AF038458.3-201ENST00000592518 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
AF038458.3-201ENST00000592518 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
AF038458.3-201ENST00000592518 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.11
AF038458.3-201ENST00000592518 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
AF038458.3-201ENST00000592518 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
AF038458.3-201ENST00000592518 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
AF038458.3-201ENST00000592518 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
AF038458.3-201ENST00000592518 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
AF038458.3-201ENST00000592518 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
AF038458.3-201ENST00000592518 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
AF038458.3-201ENST00000592518 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
AF038458.3-201ENST00000592518 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
AF038458.3-201ENST00000592518 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
AF038458.3-201ENST00000592518 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
AF038458.3-201ENST00000592518 CUL7Q14999 1698 aa15.64■□□□□ 0.09
AF038458.3-201ENST00000592518 FAM9AQ8IZU1 332 aaPredicted RBP15.64■□□□□ 0.09
AF038458.3-201ENST00000592518 ARAP1Q96P48 1450 aa15.64■□□□□ 0.09
AF038458.3-201ENST00000592518 IGF1RP08069 1367 aa15.62■□□□□ 0.09
AF038458.3-201ENST00000592518 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
AF038458.3-201ENST00000592518 KIF21BO75037 1637 aa15.58■□□□□ 0.09
AF038458.3-201ENST00000592518 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
AF038458.3-201ENST00000592518 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
AF038458.3-201ENST00000592518 SNAPC4Q5SXM2 1469 aa15.56■□□□□ 0.08
AF038458.3-201ENST00000592518 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
AF038458.3-201ENST00000592518 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
AF038458.3-201ENST00000592518 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
AF038458.3-201ENST00000592518 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms