RNA–Protein interactions for RNA: ENST00000592516.1

CARM1-210, Transcript of coactivator associated arginine methyltransferase 1, humanhuman

TSL 3

Gene CARM1, Length 696 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARM1-210ENST00000592516 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
CARM1-210ENST00000592516 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
CARM1-210ENST00000592516 ABCC9O60706 1549 aa28.18■■■□□ 2.1
CARM1-210ENST00000592516 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
CARM1-210ENST00000592516 NACADO15069 1562 aa26.75■■□□□ 1.87
CARM1-210ENST00000592516 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
CARM1-210ENST00000592516 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
CARM1-210ENST00000592516 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
CARM1-210ENST00000592516 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
CARM1-210ENST00000592516 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
CARM1-210ENST00000592516 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
CARM1-210ENST00000592516 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
CARM1-210ENST00000592516 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
CARM1-210ENST00000592516 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
CARM1-210ENST00000592516 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
CARM1-210ENST00000592516 CC2D2AQ9P2K1 1620 aa25.51■■□□□ 1.67
CARM1-210ENST00000592516 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
CARM1-210ENST00000592516 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
CARM1-210ENST00000592516 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
CARM1-210ENST00000592516 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
CARM1-210ENST00000592516 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
CARM1-210ENST00000592516 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
CARM1-210ENST00000592516 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
CARM1-210ENST00000592516 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
CARM1-210ENST00000592516 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
CARM1-210ENST00000592516 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
CARM1-210ENST00000592516 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
CARM1-210ENST00000592516 CUX2O14529 1486 aa24.35■■□□□ 1.49
CARM1-210ENST00000592516 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
CARM1-210ENST00000592516 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
CARM1-210ENST00000592516 NESP48681 1621 aa24.21■■□□□ 1.47
CARM1-210ENST00000592516 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
CARM1-210ENST00000592516 THOC2Q8NI27 1593 aaKnown RBP24.02■■□□□ 1.44
CARM1-210ENST00000592516 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
CARM1-210ENST00000592516 WIZO95785 1651 aa23.99■■□□□ 1.43
CARM1-210ENST00000592516 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
CARM1-210ENST00000592516 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
CARM1-210ENST00000592516 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
CARM1-210ENST00000592516 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
CARM1-210ENST00000592516 WDR62O43379 1518 aa23.7■■□□□ 1.38
CARM1-210ENST00000592516 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
CARM1-210ENST00000592516 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
CARM1-210ENST00000592516 CFTRP13569 1480 aa23.64■■□□□ 1.38
CARM1-210ENST00000592516 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
CARM1-210ENST00000592516 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
CARM1-210ENST00000592516 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
CARM1-210ENST00000592516 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
CARM1-210ENST00000592516 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
CARM1-210ENST00000592516 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
CARM1-210ENST00000592516 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
CARM1-210ENST00000592516 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
CARM1-210ENST00000592516 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
CARM1-210ENST00000592516 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
CARM1-210ENST00000592516 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
CARM1-210ENST00000592516 EIF4G3O43432 1585 aaKnown RBP23.03■■□□□ 1.28
CARM1-210ENST00000592516 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
CARM1-210ENST00000592516 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
CARM1-210ENST00000592516 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
CARM1-210ENST00000592516 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
CARM1-210ENST00000592516 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
CARM1-210ENST00000592516 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.265e-7■■■■■ 35
CARM1-210ENST00000592516 CHD1O14646 1710 aa22.89■■□□□ 1.26
CARM1-210ENST00000592516 SOGA1O94964 1423 aa22.84■■□□□ 1.25
CARM1-210ENST00000592516 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
CARM1-210ENST00000592516 ARHGEF11O15085 1522 aa22.83■■□□□ 1.25
CARM1-210ENST00000592516 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
CARM1-210ENST00000592516 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
CARM1-210ENST00000592516 CUX1P39880 1505 aa22.78■■□□□ 1.24
CARM1-210ENST00000592516 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
CARM1-210ENST00000592516 FBLN2P98095 1184 aa22.76■■□□□ 1.23
CARM1-210ENST00000592516 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
CARM1-210ENST00000592516 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
CARM1-210ENST00000592516 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
CARM1-210ENST00000592516 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
CARM1-210ENST00000592516 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
CARM1-210ENST00000592516 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
CARM1-210ENST00000592516 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
CARM1-210ENST00000592516 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
CARM1-210ENST00000592516 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
CARM1-210ENST00000592516 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
CARM1-210ENST00000592516 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
CARM1-210ENST00000592516 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
CARM1-210ENST00000592516 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
CARM1-210ENST00000592516 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
CARM1-210ENST00000592516 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
CARM1-210ENST00000592516 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CARM1-210ENST00000592516 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
CARM1-210ENST00000592516 TRHP20396 242 aaPredicted RBP22.39■■□□□ 1.17
CARM1-210ENST00000592516 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
CARM1-210ENST00000592516 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
CARM1-210ENST00000592516 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
CARM1-210ENST00000592516 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
CARM1-210ENST00000592516 NUP160Q12769 1436 aa22.28■■□□□ 1.16
CARM1-210ENST00000592516 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
CARM1-210ENST00000592516 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
CARM1-210ENST00000592516 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
CARM1-210ENST00000592516 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
CARM1-210ENST00000592516 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
CARM1-210ENST00000592516 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
CARM1-210ENST00000592516 CUL7Q14999 1698 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms