RNA–Protein interactions for RNA: ENST00000592262.1

GPATCH1-204, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 1,978 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-204ENST00000592262 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
GPATCH1-204ENST00000592262 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
GPATCH1-204ENST00000592262 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
GPATCH1-204ENST00000592262 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
GPATCH1-204ENST00000592262 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
GPATCH1-204ENST00000592262 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
GPATCH1-204ENST00000592262 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
GPATCH1-204ENST00000592262 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
GPATCH1-204ENST00000592262 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
GPATCH1-204ENST00000592262 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
GPATCH1-204ENST00000592262 ABCC9O60706 1549 aa20.18■□□□□ 0.82
GPATCH1-204ENST00000592262 NACADO15069 1562 aa20.08■□□□□ 0.8
GPATCH1-204ENST00000592262 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
GPATCH1-204ENST00000592262 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
GPATCH1-204ENST00000592262 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
GPATCH1-204ENST00000592262 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
GPATCH1-204ENST00000592262 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
GPATCH1-204ENST00000592262 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
GPATCH1-204ENST00000592262 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
GPATCH1-204ENST00000592262 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
GPATCH1-204ENST00000592262 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
GPATCH1-204ENST00000592262 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
GPATCH1-204ENST00000592262 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
GPATCH1-204ENST00000592262 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
GPATCH1-204ENST00000592262 WIZO95785 1651 aa19.09■□□□□ 0.65
GPATCH1-204ENST00000592262 SMARCA4P51532 1647 aa19.08■□□□□ 0.64
GPATCH1-204ENST00000592262 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
GPATCH1-204ENST00000592262 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
GPATCH1-204ENST00000592262 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
GPATCH1-204ENST00000592262 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
GPATCH1-204ENST00000592262 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
GPATCH1-204ENST00000592262 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
GPATCH1-204ENST00000592262 FOXD1Q16676 465 aa18.72■□□□□ 0.59
GPATCH1-204ENST00000592262 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
GPATCH1-204ENST00000592262 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
GPATCH1-204ENST00000592262 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
GPATCH1-204ENST00000592262 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
GPATCH1-204ENST00000592262 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
GPATCH1-204ENST00000592262 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
GPATCH1-204ENST00000592262 ADRA2BP18089 450 aa18.47■□□□□ 0.55
GPATCH1-204ENST00000592262 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
GPATCH1-204ENST00000592262 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
GPATCH1-204ENST00000592262 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
GPATCH1-204ENST00000592262 EEA1Q15075 1411 aa18.28■□□□□ 0.52
GPATCH1-204ENST00000592262 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
GPATCH1-204ENST00000592262 CFTRP13569 1480 aa18.19■□□□□ 0.5
GPATCH1-204ENST00000592262 SOGA1O94964 1423 aa18.17■□□□□ 0.5
GPATCH1-204ENST00000592262 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
GPATCH1-204ENST00000592262 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
GPATCH1-204ENST00000592262 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
GPATCH1-204ENST00000592262 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
GPATCH1-204ENST00000592262 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
GPATCH1-204ENST00000592262 BIVM-ERCC5R4GMW8 1640 aa18.06■□□□□ 0.48
GPATCH1-204ENST00000592262 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
GPATCH1-204ENST00000592262 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
GPATCH1-204ENST00000592262 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
GPATCH1-204ENST00000592262 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
GPATCH1-204ENST00000592262 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
GPATCH1-204ENST00000592262 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
GPATCH1-204ENST00000592262 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
GPATCH1-204ENST00000592262 CUX1P39880 1505 aa17.98■□□□□ 0.47
GPATCH1-204ENST00000592262 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
GPATCH1-204ENST00000592262 KIF21BO75037 1637 aa17.94■□□□□ 0.46
GPATCH1-204ENST00000592262 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
GPATCH1-204ENST00000592262 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
GPATCH1-204ENST00000592262 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
GPATCH1-204ENST00000592262 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
GPATCH1-204ENST00000592262 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
GPATCH1-204ENST00000592262 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
GPATCH1-204ENST00000592262 PRXQ9BXM0 1461 aa17.77■□□□□ 0.44
GPATCH1-204ENST00000592262 NESP48681 1621 aa17.77■□□□□ 0.44
GPATCH1-204ENST00000592262 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
GPATCH1-204ENST00000592262 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
GPATCH1-204ENST00000592262 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
GPATCH1-204ENST00000592262 HRCP23327 699 aa17.75■□□□□ 0.43
GPATCH1-204ENST00000592262 CUX2O14529 1486 aa17.74■□□□□ 0.43
GPATCH1-204ENST00000592262 CLIP1P30622 1438 aa17.73■□□□□ 0.43
GPATCH1-204ENST00000592262 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
GPATCH1-204ENST00000592262 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
GPATCH1-204ENST00000592262 IGF1RP08069 1367 aa17.67■□□□□ 0.42
GPATCH1-204ENST00000592262 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
GPATCH1-204ENST00000592262 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
GPATCH1-204ENST00000592262 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
GPATCH1-204ENST00000592262 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
GPATCH1-204ENST00000592262 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
GPATCH1-204ENST00000592262 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
GPATCH1-204ENST00000592262 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
GPATCH1-204ENST00000592262 APLP2Q06481 763 aa17.59■□□□□ 0.41
GPATCH1-204ENST00000592262 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.4
GPATCH1-204ENST00000592262 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
GPATCH1-204ENST00000592262 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
GPATCH1-204ENST00000592262 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
GPATCH1-204ENST00000592262 KCNA4P22459 653 aa17.5■□□□□ 0.39
GPATCH1-204ENST00000592262 CUL7Q14999 1698 aa17.47■□□□□ 0.39
GPATCH1-204ENST00000592262 MRC2Q9UBG0 1479 aa17.47■□□□□ 0.39
GPATCH1-204ENST00000592262 TTBK1Q5TCY1 1321 aaPredicted RBP17.46■□□□□ 0.38
GPATCH1-204ENST00000592262 ARAP1Q96P48 1450 aa17.46■□□□□ 0.38
GPATCH1-204ENST00000592262 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
GPATCH1-204ENST00000592262 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
GPATCH1-204ENST00000592262 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms