RNA–Protein interactions for RNA: ENST00000592077.5

ANKS3-223, Transcript of ankyrin repeat and sterile alpha motif domain containing 3, human

TSL 1 (best)

Gene ANKS3, Length 2,302 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKS3-223	ENST00000592077	NISCH	Q9Y2I1	1504 aa		38.87	■■■■□ 3.81
ANKS3-223	ENST00000592077	CCDC180	Q9P1Z9	1646 aa		33.18	■■■□□ 2.9
ANKS3-223	ENST00000592077	SHROOM4	Q9ULL8	1493 aa		32.95	■■■□□ 2.86
ANKS3-223	ENST00000592077	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.8	■■■□□ 2.84
ANKS3-223	ENST00000592077	DCAF8L2	P0C7V8	631 aa		32.38	■■■□□ 2.77
ANKS3-223	ENST00000592077	SUPT5H	O00267	1087 aa	Known RBP	32.2	■■■□□ 2.75
ANKS3-223	ENST00000592077	DCAF1	Q9Y4B6	1507 aa		31.88	■■■□□ 2.69
ANKS3-223	ENST00000592077	CHIC1	Q5VXU3	224 aa		31.16	■■■□□ 2.58
ANKS3-223	ENST00000592077	MYO15B	Q96JP2	1530 aa		31.07	■■■□□ 2.56
ANKS3-223	ENST00000592077	SCRIB	Q14160	1630 aa		31.04	■■■□□ 2.56
ANKS3-223	ENST00000592077	ABCC9	O60706	1549 aa		31.01	■■■□□ 2.55
ANKS3-223	ENST00000592077	NACAD	O15069	1562 aa		30.76	■■■□□ 2.51
ANKS3-223	ENST00000592077	RSF1	Q96T23	1441 aa	Predicted RBP	30.66	■■■□□ 2.5
ANKS3-223	ENST00000592077	RB1CC1	Q8TDY2	1594 aa		30.37	■■■□□ 2.45
ANKS3-223	ENST00000592077	CECR2	Q9BXF3	1484 aa		30.35	■■■□□ 2.45
ANKS3-223	ENST00000592077	LOC105371045	A0A1W2PR82	267 aa		30.24	■■■□□ 2.43
ANKS3-223	ENST00000592077	MROH2B	Q7Z745	1585 aa		30.2	■■■□□ 2.43
ANKS3-223	ENST00000592077	TRIM41	Q8WV44	630 aa		30.02	■■■□□ 2.4
ANKS3-223	ENST00000592077	WIZ	O95785	1651 aa		30.01	■■■□□ 2.4
ANKS3-223	ENST00000592077	UNC13A	Q9UPW8	1703 aa		29.93	■■■□□ 2.38
ANKS3-223	ENST00000592077	PCGF6	Q9BYE7	350 aa		29.9	■■■□□ 2.38
ANKS3-223	ENST00000592077	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	29.87	■■■□□ 2.37
ANKS3-223	ENST00000592077	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.76	■■■□□ 2.35
ANKS3-223	ENST00000592077	HRC	P23327	699 aa		29.67	■■■□□ 2.34
ANKS3-223	ENST00000592077	SMARCA4	P51532	1647 aa		29.64	■■■□□ 2.34
ANKS3-223	ENST00000592077	PABPN1	Q86U42	306 aa	Known RBP eCLIP	29.62	■■■□□ 2.33	2e-6	■■■■□ 20
ANKS3-223	ENST00000592077	BICRA	Q9NZM4	1560 aa		29.55	■■■□□ 2.32
ANKS3-223	ENST00000592077	TOP2A	P11388	1531 aa	Known RBP	29.54	■■■□□ 2.32
ANKS3-223	ENST00000592077	EHMT2	Q96KQ7	1210 aa		29.52	■■■□□ 2.32
ANKS3-223	ENST00000592077	EIF4G1	Q04637	1599 aa	Known RBP	29.44	■■■□□ 2.3
ANKS3-223	ENST00000592077	CCDC88B	A6NC98	1476 aa		29.44	■■■□□ 2.3
ANKS3-223	ENST00000592077	TRIM26	Q12899	539 aa	Predicted RBP	29.4	■■■□□ 2.3
ANKS3-223	ENST00000592077	SMARCA2	P51531	1590 aa		29.37	■■■□□ 2.29
ANKS3-223	ENST00000592077	ABCC8	Q09428	1581 aa		29.25	■■■□□ 2.27
ANKS3-223	ENST00000592077	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.12	■■■□□ 2.25
ANKS3-223	ENST00000592077	PEG3	Q9GZU2	1588 aa		29.09	■■■□□ 2.25
ANKS3-223	ENST00000592077	ATAD2B	Q9ULI0	1458 aa		28.98	■■■□□ 2.23
ANKS3-223	ENST00000592077	SOGA1	O94964	1423 aa		28.94	■■■□□ 2.22
ANKS3-223	ENST00000592077	BAZ1B	Q9UIG0	1483 aa	Known RBP	28.88	■■■□□ 2.21
ANKS3-223	ENST00000592077	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.81	■■■□□ 2.2
ANKS3-223	ENST00000592077	RUSC2	Q8N2Y8	1516 aa		28.81	■■■□□ 2.2
ANKS3-223	ENST00000592077	CSRNP3	Q8WYN3	585 aa		28.78	■■■□□ 2.2
ANKS3-223	ENST00000592077	EEA1	Q15075	1411 aa		28.73	■■■□□ 2.19
ANKS3-223	ENST00000592077	CEP162	Q5TB80	1403 aa		28.65	■■■□□ 2.18
ANKS3-223	ENST00000592077	SYNJ1	O43426	1573 aa		28.65	■■■□□ 2.18
ANKS3-223	ENST00000592077	UBTF	P17480	764 aa	Known RBP	28.65	■■■□□ 2.18
ANKS3-223	ENST00000592077	TNIK	Q9UKE5	1360 aa		28.64	■■■□□ 2.18
ANKS3-223	ENST00000592077	ZEB1	P37275	1124 aa	Predicted RBP	28.61	■■■□□ 2.17
ANKS3-223	ENST00000592077	GOLGA3	Q08378	1498 aa		28.52	■■■□□ 2.16
ANKS3-223	ENST00000592077	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.48	■■■□□ 2.15
ANKS3-223	ENST00000592077	NCAPD3	P42695	1498 aa		28.47	■■■□□ 2.15
ANKS3-223	ENST00000592077	HMGXB3	Q12766	1538 aa		28.42	■■■□□ 2.14
ANKS3-223	ENST00000592077	CEP164	Q9UPV0	1460 aa		28.39	■■■□□ 2.14
ANKS3-223	ENST00000592077	TOP2B	Q02880	1626 aa		28.33	■■■□□ 2.13
ANKS3-223	ENST00000592077	KIF21B	O75037	1637 aa		28.32	■■■□□ 2.12
ANKS3-223	ENST00000592077	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.3	■■■□□ 2.12
ANKS3-223	ENST00000592077	RAPGEF2	Q9Y4G8	1499 aa		28.24	■■■□□ 2.11
ANKS3-223	ENST00000592077	BIVM-ERCC5	R4GMW8	1640 aa		28.21	■■■□□ 2.11
ANKS3-223	ENST00000592077	CCER1	Q8TC90	406 aa	Predicted RBP	28.2	■■■□□ 2.11
ANKS3-223	ENST00000592077	CLIP1	P30622	1438 aa		28.2	■■■□□ 2.1
ANKS3-223	ENST00000592077	RANGAP1	P46060	587 aa	Predicted RBP	28.16	■■■□□ 2.1
ANKS3-223	ENST00000592077	CFTR	P13569	1480 aa		28.16	■■■□□ 2.1
ANKS3-223	ENST00000592077	CUX1	P39880	1505 aa		28.13	■■■□□ 2.09
ANKS3-223	ENST00000592077	VPS8	Q8N3P4	1428 aa		28.02	■■■□□ 2.08
ANKS3-223	ENST00000592077	CC2D2A	Q9P2K1	1620 aa		28.02	■■■□□ 2.08
ANKS3-223	ENST00000592077	PRX	Q9BXM0	1461 aa		27.99	■■■□□ 2.07
ANKS3-223	ENST00000592077	KIF27	Q86VH2	1401 aa		27.95	■■■□□ 2.07
ANKS3-223	ENST00000592077	APLP2	Q06481	763 aa		27.94	■■■□□ 2.06
ANKS3-223	ENST00000592077	ERICH3	Q5RHP9	1530 aa		27.93	■■■□□ 2.06
ANKS3-223	ENST00000592077	CADPS	Q9ULU8	1353 aa		27.92	■■■□□ 2.06
ANKS3-223	ENST00000592077	PRDM2	Q13029	1718 aa		27.87	■■■□□ 2.05
ANKS3-223	ENST00000592077	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.83	■■■□□ 2.04
ANKS3-223	ENST00000592077	ARAP1	Q96P48	1450 aa		27.75	■■■□□ 2.03
ANKS3-223	ENST00000592077	CUX2	O14529	1486 aa		27.74	■■■□□ 2.03
ANKS3-223	ENST00000592077	IGF1R	P08069	1367 aa		27.69	■■■□□ 2.02
ANKS3-223	ENST00000592077	FGD5	Q6ZNL6	1462 aa		27.68	■■■□□ 2.02
ANKS3-223	ENST00000592077	FANCD2	Q9BXW9	1451 aa		27.63	■■■□□ 2.01
ANKS3-223	ENST00000592077	KANK4	Q5T7N3	995 aa	Predicted RBP	27.62	■■■□□ 2.01
ANKS3-223	ENST00000592077	ARHGAP35	Q9NRY4	1499 aa		27.58	■■■□□ 2.01
ANKS3-223	ENST00000592077	CARMIL1	Q5VZK9	1371 aa		27.57	■■■□□ 2
ANKS3-223	ENST00000592077	NES	P48681	1621 aa		27.53	■■■□□ 2
ANKS3-223	ENST00000592077	DIEXF	Q68CQ4	756 aa	Known RBP	27.46	■■□□□ 1.99
ANKS3-223	ENST00000592077	RAD54L2	Q9Y4B4	1467 aa		27.46	■■□□□ 1.99
ANKS3-223	ENST00000592077	DNMBP	Q6XZF7	1577 aa		27.43	■■□□□ 1.98
ANKS3-223	ENST00000592077	TOPBP1	Q92547	1522 aa		27.42	■■□□□ 1.98
ANKS3-223	ENST00000592077	POLA1	P09884	1462 aa	Predicted RBP	27.39	■■□□□ 1.98
ANKS3-223	ENST00000592077	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.35	■■□□□ 1.97
ANKS3-223	ENST00000592077	ABCA10	Q8WWZ4	1543 aa		27.35	■■□□□ 1.97
ANKS3-223	ENST00000592077	LAMC3	Q9Y6N6	1575 aa		27.34	■■□□□ 1.97
ANKS3-223	ENST00000592077	DNAJC5B	Q9UF47	199 aa		27.32	■■□□□ 1.96
ANKS3-223	ENST00000592077	RRBP1	Q9P2E9	1410 aa	Known RBP	27.32	■■□□□ 1.96
ANKS3-223	ENST00000592077	P3H3	Q8IVL6	736 aa		27.31	■■□□□ 1.96
ANKS3-223	ENST00000592077	CCNB3	Q8WWL7	1395 aa		27.26	■■□□□ 1.95
ANKS3-223	ENST00000592077	URB2	Q14146	1524 aa	Known RBP	27.24	■■□□□ 1.95
ANKS3-223	ENST00000592077	ITGAE	P38570	1179 aa		27.22	■■□□□ 1.95
ANKS3-223	ENST00000592077	DHX57	Q6P158	1386 aa	Known RBP	27.21	■■□□□ 1.95
ANKS3-223	ENST00000592077	TIAM1	Q13009	1591 aa		27.2	■■□□□ 1.95
ANKS3-223	ENST00000592077	ATP1B4	Q9UN42	357 aa	Predicted RBP	27.18	■■□□□ 1.94
ANKS3-223	ENST00000592077	MAP3K1	Q13233	1512 aa		27.17	■■□□□ 1.94
ANKS3-223	ENST00000592077	FHAD1	B1AJZ9	1412 aa		27.16	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms