RNA–Protein interactions for RNA: ENST00000592059.5

PTPN2-214, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 4

Gene PTPN2, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-214ENST00000592059 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
PTPN2-214ENST00000592059 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
PTPN2-214ENST00000592059 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
PTPN2-214ENST00000592059 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
PTPN2-214ENST00000592059 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
PTPN2-214ENST00000592059 FOXD1Q16676 465 aa14.61□□□□□ -0.07
PTPN2-214ENST00000592059 MSH5O43196 834 aa13.88□□□□□ -0.19
PTPN2-214ENST00000592059 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
PTPN2-214ENST00000592059 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
PTPN2-214ENST00000592059 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
PTPN2-214ENST00000592059 ADRA2BP18089 450 aa13.08□□□□□ -0.32
PTPN2-214ENST00000592059 PLPPR3Q6T4P5 718 aa12.92□□□□□ -0.34
PTPN2-214ENST00000592059 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
PTPN2-214ENST00000592059 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
PTPN2-214ENST00000592059 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-214ENST00000592059 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
PTPN2-214ENST00000592059 ABCC9O60706 1549 aa12.21□□□□□ -0.46
PTPN2-214ENST00000592059 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
PTPN2-214ENST00000592059 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
PTPN2-214ENST00000592059 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
PTPN2-214ENST00000592059 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.56
PTPN2-214ENST00000592059 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
PTPN2-214ENST00000592059 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
PTPN2-214ENST00000592059 NACADO15069 1562 aa11.53□□□□□ -0.56
PTPN2-214ENST00000592059 HOXD11P31277 338 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-214ENST00000592059 UNC13AQ9UPW8 1703 aa11.48□□□□□ -0.57
PTPN2-214ENST00000592059 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
PTPN2-214ENST00000592059 POTEHQ6S545 545 aa11.41□□□□□ -0.58
PTPN2-214ENST00000592059 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPN2-214ENST00000592059 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
PTPN2-214ENST00000592059 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
PTPN2-214ENST00000592059 ZCCHC6Q5VYS8 1495 aaKnown RBP11.35□□□□□ -0.59
PTPN2-214ENST00000592059 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
PTPN2-214ENST00000592059 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
PTPN2-214ENST00000592059 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-214ENST00000592059 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
PTPN2-214ENST00000592059 SCRIBQ14160 1630 aa11.16□□□□□ -0.62
PTPN2-214ENST00000592059 CC2D2AQ9P2K1 1620 aa11.05□□□□□ -0.64
PTPN2-214ENST00000592059 SHROOM4Q9ULL8 1493 aa11.05□□□□□ -0.64
PTPN2-214ENST00000592059 EIF4G1Q04637 1599 aaKnown RBP11.02□□□□□ -0.65
PTPN2-214ENST00000592059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPN2-214ENST00000592059 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
PTPN2-214ENST00000592059 DSG3P32926 999 aa10.84□□□□□ -0.67
PTPN2-214ENST00000592059 CAPN15O75808 1086 aa10.77□□□□□ -0.69
PTPN2-214ENST00000592059 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
PTPN2-214ENST00000592059 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-214ENST00000592059 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
PTPN2-214ENST00000592059 ATAD2BQ9ULI0 1458 aa10.67□□□□□ -0.7
PTPN2-214ENST00000592059 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
PTPN2-214ENST00000592059 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
PTPN2-214ENST00000592059 MROH2BQ7Z745 1585 aa10.59□□□□□ -0.71
PTPN2-214ENST00000592059 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
PTPN2-214ENST00000592059 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
PTPN2-214ENST00000592059 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
PTPN2-214ENST00000592059 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
PTPN2-214ENST00000592059 NESP48681 1621 aa10.55□□□□□ -0.72
PTPN2-214ENST00000592059 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
PTPN2-214ENST00000592059 ABCB7O75027 752 aa10.49□□□□□ -0.73
PTPN2-214ENST00000592059 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
PTPN2-214ENST00000592059 WIZO95785 1651 aa10.47□□□□□ -0.73
PTPN2-214ENST00000592059 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.73
PTPN2-214ENST00000592059 TRHP20396 242 aaPredicted RBP10.44□□□□□ -0.74
PTPN2-214ENST00000592059 CUX2O14529 1486 aa10.43□□□□□ -0.74
PTPN2-214ENST00000592059 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
PTPN2-214ENST00000592059 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
PTPN2-214ENST00000592059 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
PTPN2-214ENST00000592059 CHRDL2Q6WN34 429 aa10.4□□□□□ -0.74
PTPN2-214ENST00000592059 LAMC3Q9Y6N6 1575 aa10.39□□□□□ -0.75
PTPN2-214ENST00000592059 SP7Q8TDD2 431 aaPredicted RBP10.38□□□□□ -0.75
PTPN2-214ENST00000592059 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
PTPN2-214ENST00000592059 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
PTPN2-214ENST00000592059 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
PTPN2-214ENST00000592059 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
PTPN2-214ENST00000592059 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
PTPN2-214ENST00000592059 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
PTPN2-214ENST00000592059 APLP2Q06481 763 aa10.26□□□□□ -0.77
PTPN2-214ENST00000592059 CFTRP13569 1480 aa10.25□□□□□ -0.77
PTPN2-214ENST00000592059 WDR62O43379 1518 aa10.24□□□□□ -0.77
PTPN2-214ENST00000592059 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
PTPN2-214ENST00000592059 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
PTPN2-214ENST00000592059 CCDC88BA6NC98 1476 aa10.2□□□□□ -0.78
PTPN2-214ENST00000592059 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
PTPN2-214ENST00000592059 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
PTPN2-214ENST00000592059 SLC4A2P04920 1241 aa10.18□□□□□ -0.78
PTPN2-214ENST00000592059 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
PTPN2-214ENST00000592059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
PTPN2-214ENST00000592059 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
PTPN2-214ENST00000592059 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
PTPN2-214ENST00000592059 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
PTPN2-214ENST00000592059 HAX1O00165 279 aa10.02□□□□□ -0.81
PTPN2-214ENST00000592059 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
PTPN2-214ENST00000592059 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
PTPN2-214ENST00000592059 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
PTPN2-214ENST00000592059 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
PTPN2-214ENST00000592059 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
PTPN2-214ENST00000592059 POLA2Q14181 598 aa9.98□□□□□ -0.81
PTPN2-214ENST00000592059 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
PTPN2-214ENST00000592059 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
PTPN2-214ENST00000592059 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.824e-6■■■■■ 31
PTPN2-214ENST00000592059 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms