RNA–Protein interactions for RNA: ENST00000591602.1

PPP6R1-207, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 5

Gene PPP6R1, Length 520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-207ENST00000591602 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
PPP6R1-207ENST00000591602 CCDC180Q9P1Z9 1646 aa35■■■■□ 3.19
PPP6R1-207ENST00000591602 ABCC9O60706 1549 aa34.14■■■■□ 3.06
PPP6R1-207ENST00000591602 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
PPP6R1-207ENST00000591602 NACADO15069 1562 aa32.85■■■□□ 2.85
PPP6R1-207ENST00000591602 ZCCHC6Q5VYS8 1495 aaKnown RBP32.81■■■□□ 2.84
PPP6R1-207ENST00000591602 DCAF8L2P0C7V8 631 aa32.79■■■□□ 2.84
PPP6R1-207ENST00000591602 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
PPP6R1-207ENST00000591602 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
PPP6R1-207ENST00000591602 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
PPP6R1-207ENST00000591602 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
PPP6R1-207ENST00000591602 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
PPP6R1-207ENST00000591602 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.69
PPP6R1-207ENST00000591602 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.64
PPP6R1-207ENST00000591602 DNAJC5BQ9UF47 199 aa31.19■■■□□ 2.58
PPP6R1-207ENST00000591602 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
PPP6R1-207ENST00000591602 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
PPP6R1-207ENST00000591602 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
PPP6R1-207ENST00000591602 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
PPP6R1-207ENST00000591602 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.47
PPP6R1-207ENST00000591602 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.45
PPP6R1-207ENST00000591602 ATAD2BQ9ULI0 1458 aa30.32■■■□□ 2.44
PPP6R1-207ENST00000591602 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
PPP6R1-207ENST00000591602 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
PPP6R1-207ENST00000591602 PEG3Q9GZU2 1588 aa30.22■■■□□ 2.43
PPP6R1-207ENST00000591602 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
PPP6R1-207ENST00000591602 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
PPP6R1-207ENST00000591602 WIZO95785 1651 aa30.01■■■□□ 2.4
PPP6R1-207ENST00000591602 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
PPP6R1-207ENST00000591602 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
PPP6R1-207ENST00000591602 NESP48681 1621 aa29.56■■■□□ 2.32
PPP6R1-207ENST00000591602 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
PPP6R1-207ENST00000591602 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
PPP6R1-207ENST00000591602 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.3
PPP6R1-207ENST00000591602 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
PPP6R1-207ENST00000591602 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
PPP6R1-207ENST00000591602 SUPT5HO00267 1087 aaKnown RBP29.26■■■□□ 2.27
PPP6R1-207ENST00000591602 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
PPP6R1-207ENST00000591602 CFTRP13569 1480 aa29.25■■■□□ 2.27
PPP6R1-207ENST00000591602 THOC2Q8NI27 1593 aaKnown RBP29.14■■■□□ 2.26
PPP6R1-207ENST00000591602 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
PPP6R1-207ENST00000591602 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
PPP6R1-207ENST00000591602 CUX2O14529 1486 aa29.09■■■□□ 2.25
PPP6R1-207ENST00000591602 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
PPP6R1-207ENST00000591602 MRC2Q9UBG0 1479 aa29.02■■■□□ 2.24
PPP6R1-207ENST00000591602 WDR62O43379 1518 aa28.92■■■□□ 2.22
PPP6R1-207ENST00000591602 URB2Q14146 1524 aaKnown RBP28.81■■■□□ 2.2
PPP6R1-207ENST00000591602 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
PPP6R1-207ENST00000591602 DNMBPQ6XZF7 1577 aa28.63■■■□□ 2.17
PPP6R1-207ENST00000591602 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
PPP6R1-207ENST00000591602 CUX1P39880 1505 aa28.46■■■□□ 2.15
PPP6R1-207ENST00000591602 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
PPP6R1-207ENST00000591602 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
PPP6R1-207ENST00000591602 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
PPP6R1-207ENST00000591602 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
PPP6R1-207ENST00000591602 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
PPP6R1-207ENST00000591602 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
PPP6R1-207ENST00000591602 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
PPP6R1-207ENST00000591602 SOGA1O94964 1423 aa28.26■■■□□ 2.11
PPP6R1-207ENST00000591602 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
PPP6R1-207ENST00000591602 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
PPP6R1-207ENST00000591602 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
PPP6R1-207ENST00000591602 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
PPP6R1-207ENST00000591602 WDR97A6NE52 1622 aa28.15■■■□□ 2.1
PPP6R1-207ENST00000591602 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.09
PPP6R1-207ENST00000591602 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
PPP6R1-207ENST00000591602 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
PPP6R1-207ENST00000591602 DNAJC5Q9H3Z4 198 aa28.04■■■□□ 2.08
PPP6R1-207ENST00000591602 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
PPP6R1-207ENST00000591602 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.07
PPP6R1-207ENST00000591602 GRIN2BQ13224 1484 aa27.95■■■□□ 2.06
PPP6R1-207ENST00000591602 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
PPP6R1-207ENST00000591602 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
PPP6R1-207ENST00000591602 MAGI1Q96QZ7 1491 aaPredicted RBP27.88■■■□□ 2.05
PPP6R1-207ENST00000591602 CHD1O14646 1710 aa27.87■■■□□ 2.05
PPP6R1-207ENST00000591602 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
PPP6R1-207ENST00000591602 FBLN2P98095 1184 aa27.78■■■□□ 2.04
PPP6R1-207ENST00000591602 SYNJ2O15056 1496 aa27.76■■■□□ 2.04
PPP6R1-207ENST00000591602 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
PPP6R1-207ENST00000591602 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
PPP6R1-207ENST00000591602 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
PPP6R1-207ENST00000591602 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
PPP6R1-207ENST00000591602 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
PPP6R1-207ENST00000591602 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
PPP6R1-207ENST00000591602 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
PPP6R1-207ENST00000591602 CLASP1Q7Z460 1538 aa27.56■■■□□ 2
PPP6R1-207ENST00000591602 CUL7Q14999 1698 aa27.54■■■□□ 2
PPP6R1-207ENST00000591602 IGF1RP08069 1367 aa27.52■■■□□ 2
PPP6R1-207ENST00000591602 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
PPP6R1-207ENST00000591602 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
PPP6R1-207ENST00000591602 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
PPP6R1-207ENST00000591602 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
PPP6R1-207ENST00000591602 NUP160Q12769 1436 aa27.46■■□□□ 1.99
PPP6R1-207ENST00000591602 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
PPP6R1-207ENST00000591602 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
PPP6R1-207ENST00000591602 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
PPP6R1-207ENST00000591602 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
PPP6R1-207ENST00000591602 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
PPP6R1-207ENST00000591602 RAPGEF2Q9Y4G8 1499 aa27.25■■□□□ 1.95
PPP6R1-207ENST00000591602 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms