RNA–Protein interactions for RNA: ENST00000591485.5

HKR1-224, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4

Gene HKR1, Length 664 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-224ENST00000591485 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
HKR1-224ENST00000591485 ABCC9O60706 1549 aa34.11■■■■□ 3.05
HKR1-224ENST00000591485 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
HKR1-224ENST00000591485 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
HKR1-224ENST00000591485 NACADO15069 1562 aa32.15■■■□□ 2.74
HKR1-224ENST00000591485 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
HKR1-224ENST00000591485 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
HKR1-224ENST00000591485 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
HKR1-224ENST00000591485 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
HKR1-224ENST00000591485 MYO15BQ96JP2 1530 aa31.64■■■□□ 2.66
HKR1-224ENST00000591485 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
HKR1-224ENST00000591485 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
HKR1-224ENST00000591485 DCAF1Q9Y4B6 1507 aa31.23■■■□□ 2.59
HKR1-224ENST00000591485 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
HKR1-224ENST00000591485 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
HKR1-224ENST00000591485 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
HKR1-224ENST00000591485 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
HKR1-224ENST00000591485 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
HKR1-224ENST00000591485 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
HKR1-224ENST00000591485 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
HKR1-224ENST00000591485 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
HKR1-224ENST00000591485 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
HKR1-224ENST00000591485 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
HKR1-224ENST00000591485 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
HKR1-224ENST00000591485 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
HKR1-224ENST00000591485 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
HKR1-224ENST00000591485 CUX2O14529 1486 aa29.36■■■□□ 2.29
HKR1-224ENST00000591485 NESP48681 1621 aa29.3■■■□□ 2.28
HKR1-224ENST00000591485 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
HKR1-224ENST00000591485 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
HKR1-224ENST00000591485 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
HKR1-224ENST00000591485 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
HKR1-224ENST00000591485 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.22
HKR1-224ENST00000591485 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
HKR1-224ENST00000591485 WIZO95785 1651 aa28.86■■■□□ 2.21
HKR1-224ENST00000591485 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
HKR1-224ENST00000591485 CADPSQ9ULU8 1353 aa28.81■■■□□ 2.2
HKR1-224ENST00000591485 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
HKR1-224ENST00000591485 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
HKR1-224ENST00000591485 WDR62O43379 1518 aa28.53■■■□□ 2.16
HKR1-224ENST00000591485 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
HKR1-224ENST00000591485 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
HKR1-224ENST00000591485 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
HKR1-224ENST00000591485 CFTRP13569 1480 aa28.44■■■□□ 2.14
HKR1-224ENST00000591485 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
HKR1-224ENST00000591485 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
HKR1-224ENST00000591485 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
HKR1-224ENST00000591485 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
HKR1-224ENST00000591485 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
HKR1-224ENST00000591485 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
HKR1-224ENST00000591485 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
HKR1-224ENST00000591485 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
HKR1-224ENST00000591485 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
HKR1-224ENST00000591485 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
HKR1-224ENST00000591485 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
HKR1-224ENST00000591485 EIF4G3O43432 1585 aaKnown RBP27.72■■■□□ 2.03
HKR1-224ENST00000591485 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
HKR1-224ENST00000591485 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
HKR1-224ENST00000591485 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
HKR1-224ENST00000591485 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
HKR1-224ENST00000591485 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
HKR1-224ENST00000591485 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
HKR1-224ENST00000591485 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
HKR1-224ENST00000591485 CHD1O14646 1710 aa27.58■■■□□ 2.01
HKR1-224ENST00000591485 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
HKR1-224ENST00000591485 SOGA1O94964 1423 aa27.54■■■□□ 2
HKR1-224ENST00000591485 FBLN2P98095 1184 aa27.54■■■□□ 2
HKR1-224ENST00000591485 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
HKR1-224ENST00000591485 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
HKR1-224ENST00000591485 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
HKR1-224ENST00000591485 CUX1P39880 1505 aa27.42■■□□□ 1.98
HKR1-224ENST00000591485 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
HKR1-224ENST00000591485 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
HKR1-224ENST00000591485 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
HKR1-224ENST00000591485 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
HKR1-224ENST00000591485 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
HKR1-224ENST00000591485 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
HKR1-224ENST00000591485 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
HKR1-224ENST00000591485 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
HKR1-224ENST00000591485 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
HKR1-224ENST00000591485 GAPVD1Q14C86 1478 aa27.18■■□□□ 1.94
HKR1-224ENST00000591485 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
HKR1-224ENST00000591485 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
HKR1-224ENST00000591485 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
HKR1-224ENST00000591485 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
HKR1-224ENST00000591485 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
HKR1-224ENST00000591485 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
HKR1-224ENST00000591485 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
HKR1-224ENST00000591485 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
HKR1-224ENST00000591485 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
HKR1-224ENST00000591485 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
HKR1-224ENST00000591485 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
HKR1-224ENST00000591485 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
HKR1-224ENST00000591485 NUP160Q12769 1436 aa26.82■■□□□ 1.88
HKR1-224ENST00000591485 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
HKR1-224ENST00000591485 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.87
HKR1-224ENST00000591485 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
HKR1-224ENST00000591485 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
HKR1-224ENST00000591485 PRG4Q92954 1404 aaPredicted RBP26.6■■□□□ 1.85
HKR1-224ENST00000591485 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms