RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-223ENST00000591471 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
HKR1-223ENST00000591471 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
HKR1-223ENST00000591471 ZCCHC6Q5VYS8 1495 aaKnown RBP14.83□□□□□ -0.04
HKR1-223ENST00000591471 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
HKR1-223ENST00000591471 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
HKR1-223ENST00000591471 NACADO15069 1562 aa14.56□□□□□ -0.08
HKR1-223ENST00000591471 ABCC9O60706 1549 aa14.49□□□□□ -0.09
HKR1-223ENST00000591471 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
HKR1-223ENST00000591471 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
HKR1-223ENST00000591471 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
HKR1-223ENST00000591471 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
HKR1-223ENST00000591471 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
HKR1-223ENST00000591471 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
HKR1-223ENST00000591471 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
HKR1-223ENST00000591471 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
HKR1-223ENST00000591471 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
HKR1-223ENST00000591471 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
HKR1-223ENST00000591471 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
HKR1-223ENST00000591471 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
HKR1-223ENST00000591471 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
HKR1-223ENST00000591471 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
HKR1-223ENST00000591471 SMARCA2P51531 1590 aa13.46□□□□□ -0.25
HKR1-223ENST00000591471 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
HKR1-223ENST00000591471 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
HKR1-223ENST00000591471 WIZO95785 1651 aa13.39□□□□□ -0.27
HKR1-223ENST00000591471 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
HKR1-223ENST00000591471 ATAD2BQ9ULI0 1458 aa13.37□□□□□ -0.27
HKR1-223ENST00000591471 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
HKR1-223ENST00000591471 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
HKR1-223ENST00000591471 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
HKR1-223ENST00000591471 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
HKR1-223ENST00000591471 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
HKR1-223ENST00000591471 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
HKR1-223ENST00000591471 CFTRP13569 1480 aa12.99□□□□□ -0.33
HKR1-223ENST00000591471 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
HKR1-223ENST00000591471 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.35
HKR1-223ENST00000591471 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
HKR1-223ENST00000591471 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
HKR1-223ENST00000591471 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
HKR1-223ENST00000591471 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
HKR1-223ENST00000591471 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
HKR1-223ENST00000591471 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
HKR1-223ENST00000591471 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
HKR1-223ENST00000591471 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
HKR1-223ENST00000591471 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
HKR1-223ENST00000591471 CHIC1Q5VXU3 224 aa12.7□□□□□ -0.38
HKR1-223ENST00000591471 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
HKR1-223ENST00000591471 NESP48681 1621 aa12.68□□□□□ -0.38
HKR1-223ENST00000591471 CUX1P39880 1505 aa12.67□□□□□ -0.38
HKR1-223ENST00000591471 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
HKR1-223ENST00000591471 WDR62O43379 1518 aa12.66□□□□□ -0.38
HKR1-223ENST00000591471 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
HKR1-223ENST00000591471 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
HKR1-223ENST00000591471 EEA1Q15075 1411 aa12.62□□□□□ -0.39
HKR1-223ENST00000591471 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
HKR1-223ENST00000591471 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
HKR1-223ENST00000591471 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
HKR1-223ENST00000591471 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
HKR1-223ENST00000591471 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
HKR1-223ENST00000591471 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.4
HKR1-223ENST00000591471 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
HKR1-223ENST00000591471 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
HKR1-223ENST00000591471 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
HKR1-223ENST00000591471 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
HKR1-223ENST00000591471 KIF21BO75037 1637 aa12.47□□□□□ -0.41
HKR1-223ENST00000591471 CUL7Q14999 1698 aa12.44□□□□□ -0.42
HKR1-223ENST00000591471 CUX2O14529 1486 aa12.44□□□□□ -0.42
HKR1-223ENST00000591471 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
HKR1-223ENST00000591471 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
HKR1-223ENST00000591471 SOGA1O94964 1423 aa12.42□□□□□ -0.42
HKR1-223ENST00000591471 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
HKR1-223ENST00000591471 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
HKR1-223ENST00000591471 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
HKR1-223ENST00000591471 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
HKR1-223ENST00000591471 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
HKR1-223ENST00000591471 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
HKR1-223ENST00000591471 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
HKR1-223ENST00000591471 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
HKR1-223ENST00000591471 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
HKR1-223ENST00000591471 IGF1RP08069 1367 aa12.3□□□□□ -0.44
HKR1-223ENST00000591471 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
HKR1-223ENST00000591471 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
HKR1-223ENST00000591471 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
HKR1-223ENST00000591471 CTTNBP2Q8WZ74 1663 aa12.25□□□□□ -0.45
HKR1-223ENST00000591471 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
HKR1-223ENST00000591471 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
HKR1-223ENST00000591471 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
HKR1-223ENST00000591471 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
HKR1-223ENST00000591471 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
HKR1-223ENST00000591471 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
HKR1-223ENST00000591471 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
HKR1-223ENST00000591471 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.46
HKR1-223ENST00000591471 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
HKR1-223ENST00000591471 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
HKR1-223ENST00000591471 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
HKR1-223ENST00000591471 NUP160Q12769 1436 aa12.12□□□□□ -0.47
HKR1-223ENST00000591471 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
HKR1-223ENST00000591471 CHD1O14646 1710 aa12.09□□□□□ -0.47
HKR1-223ENST00000591471 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
HKR1-223ENST00000591471 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms