RNA–Protein interactions for RNA: ENST00000591234.5
Retrieved 5 of 5 RNA–protein pairs in 2.8 ms
ABCA5-211, Transcript of ATP binding cassette subfamily A member 5, human
TSL 2
Gene ABCA5, Length 3,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA5-211 | ENST00000591234 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 2.86 | □□□□□ -1.95 | 5e-8 | ■■■■■ 27 |
ABCA5-211 | ENST00000591234 | HLTF | Q14527 | 1009 aa | Known RBP eCLIP | 2.95 | □□□□□ -1.94 | 2e-7 | ■□□□□ 9.2 |
ABCA5-211 | ENST00000591234 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 4.07 | □□□□□ -1.76 | 1e-6 | ■■■□□ 16.5 |
ABCA5-211 | ENST00000591234 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 2.15 | □□□□□ -2.07 | 5e-6 | ■■■■□ 25.9 |
ABCA5-211 | ENST00000591234 | SF3A3 | Q12874 | 501 aa | Known RBP eCLIP | 2.71 | □□□□□ -1.98 | 5e-6 | ■■■■■ 35.2 |