RNA–Protein interactions for RNA: ENST00000590781.1

TNPO2-217, Transcript of transportin 2, humanhuman

TSL 4

Gene TNPO2, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-217ENST00000590781 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
TNPO2-217ENST00000590781 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
TNPO2-217ENST00000590781 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
TNPO2-217ENST00000590781 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
TNPO2-217ENST00000590781 FOXD1Q16676 465 aa21.92■■□□□ 1.1
TNPO2-217ENST00000590781 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
TNPO2-217ENST00000590781 NISCHQ9Y2I1 1504 aa21.21■□□□□ 0.99
TNPO2-217ENST00000590781 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
TNPO2-217ENST00000590781 ADRA2BP18089 450 aa20.72■□□□□ 0.91
TNPO2-217ENST00000590781 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
TNPO2-217ENST00000590781 MSH5O43196 834 aa20.34■□□□□ 0.85
TNPO2-217ENST00000590781 ABCC9O60706 1549 aa20.07■□□□□ 0.8
TNPO2-217ENST00000590781 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
TNPO2-217ENST00000590781 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
TNPO2-217ENST00000590781 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
TNPO2-217ENST00000590781 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
TNPO2-217ENST00000590781 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
TNPO2-217ENST00000590781 PPP4R3CPQ6ZMV5 832 aa18.82■□□□□ 0.6
TNPO2-217ENST00000590781 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
TNPO2-217ENST00000590781 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
TNPO2-217ENST00000590781 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
TNPO2-217ENST00000590781 NACADO15069 1562 aa18.41■□□□□ 0.54
TNPO2-217ENST00000590781 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
TNPO2-217ENST00000590781 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
TNPO2-217ENST00000590781 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
TNPO2-217ENST00000590781 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
TNPO2-217ENST00000590781 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
TNPO2-217ENST00000590781 HOXD11P31277 338 aaPredicted RBP18.19■□□□□ 0.5
TNPO2-217ENST00000590781 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
TNPO2-217ENST00000590781 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
TNPO2-217ENST00000590781 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
TNPO2-217ENST00000590781 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
TNPO2-217ENST00000590781 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
TNPO2-217ENST00000590781 KCNA4P22459 653 aa17.92■□□□□ 0.46
TNPO2-217ENST00000590781 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
TNPO2-217ENST00000590781 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
TNPO2-217ENST00000590781 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
TNPO2-217ENST00000590781 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
TNPO2-217ENST00000590781 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
TNPO2-217ENST00000590781 CUX2O14529 1486 aa17.52■□□□□ 0.4
TNPO2-217ENST00000590781 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
TNPO2-217ENST00000590781 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
TNPO2-217ENST00000590781 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
TNPO2-217ENST00000590781 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
TNPO2-217ENST00000590781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
TNPO2-217ENST00000590781 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
TNPO2-217ENST00000590781 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
TNPO2-217ENST00000590781 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
TNPO2-217ENST00000590781 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
TNPO2-217ENST00000590781 NESP48681 1621 aa17.07■□□□□ 0.32
TNPO2-217ENST00000590781 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
TNPO2-217ENST00000590781 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
TNPO2-217ENST00000590781 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
TNPO2-217ENST00000590781 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
TNPO2-217ENST00000590781 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
TNPO2-217ENST00000590781 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
TNPO2-217ENST00000590781 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
TNPO2-217ENST00000590781 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
TNPO2-217ENST00000590781 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
TNPO2-217ENST00000590781 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
TNPO2-217ENST00000590781 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
TNPO2-217ENST00000590781 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
TNPO2-217ENST00000590781 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
TNPO2-217ENST00000590781 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
TNPO2-217ENST00000590781 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
TNPO2-217ENST00000590781 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
TNPO2-217ENST00000590781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
TNPO2-217ENST00000590781 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
TNPO2-217ENST00000590781 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
TNPO2-217ENST00000590781 WDR62O43379 1518 aa16.58■□□□□ 0.24
TNPO2-217ENST00000590781 CAPN15O75808 1086 aa16.57■□□□□ 0.24
TNPO2-217ENST00000590781 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
TNPO2-217ENST00000590781 ZBTB22O15209 634 aa16.52■□□□□ 0.24
TNPO2-217ENST00000590781 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
TNPO2-217ENST00000590781 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
TNPO2-217ENST00000590781 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
TNPO2-217ENST00000590781 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
TNPO2-217ENST00000590781 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
TNPO2-217ENST00000590781 APLP2Q06481 763 aa16.49■□□□□ 0.23
TNPO2-217ENST00000590781 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
TNPO2-217ENST00000590781 DSG3P32926 999 aa16.43■□□□□ 0.22
TNPO2-217ENST00000590781 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
TNPO2-217ENST00000590781 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
TNPO2-217ENST00000590781 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
TNPO2-217ENST00000590781 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
TNPO2-217ENST00000590781 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
TNPO2-217ENST00000590781 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
TNPO2-217ENST00000590781 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
TNPO2-217ENST00000590781 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
TNPO2-217ENST00000590781 ABCB7O75027 752 aa16.24■□□□□ 0.19
TNPO2-217ENST00000590781 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
TNPO2-217ENST00000590781 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
TNPO2-217ENST00000590781 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
TNPO2-217ENST00000590781 CFTRP13569 1480 aa16.16■□□□□ 0.18
TNPO2-217ENST00000590781 WIZO95785 1651 aa16.11■□□□□ 0.17
TNPO2-217ENST00000590781 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
TNPO2-217ENST00000590781 POLA2Q14181 598 aa16.05■□□□□ 0.16
TNPO2-217ENST00000590781 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
TNPO2-217ENST00000590781 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
TNPO2-217ENST00000590781 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms