RNA–Protein interactions for RNA: ENST00000590439.2

SUGP1-211, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 5

Gene SUGP1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-211ENST00000590439 NISCHQ9Y2I1 1504 aa46.48■■■■■ 5.03
SUGP1-211ENST00000590439 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
SUGP1-211ENST00000590439 ABCC9O60706 1549 aa41.68■■■■■ 4.26
SUGP1-211ENST00000590439 RB1CC1Q8TDY2 1594 aa39.69■■■■□ 3.94
SUGP1-211ENST00000590439 NACADO15069 1562 aa39.4■■■■□ 3.9
SUGP1-211ENST00000590439 DCAF8L2P0C7V8 631 aa39.28■■■■□ 3.88
SUGP1-211ENST00000590439 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
SUGP1-211ENST00000590439 UNC13AQ9UPW8 1703 aa38.89■■■■□ 3.82
SUGP1-211ENST00000590439 MYO15BQ96JP2 1530 aa38.81■■■■□ 3.8
SUGP1-211ENST00000590439 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
SUGP1-211ENST00000590439 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
SUGP1-211ENST00000590439 BICRAQ9NZM4 1560 aa38.51■■■■□ 3.76
SUGP1-211ENST00000590439 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
SUGP1-211ENST00000590439 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
SUGP1-211ENST00000590439 SHROOM4Q9ULL8 1493 aa37.94■■■■□ 3.66
SUGP1-211ENST00000590439 CC2D2AQ9P2K1 1620 aa37.66■■■■□ 3.62
SUGP1-211ENST00000590439 EIF4G1Q04637 1599 aaKnown RBP37.58■■■■□ 3.61
SUGP1-211ENST00000590439 CECR2Q9BXF3 1484 aa37.52■■■■□ 3.6
SUGP1-211ENST00000590439 NCAPD3P42695 1498 aa36.32■■■■□ 3.41
SUGP1-211ENST00000590439 SMARCA4P51532 1647 aa36.3■■■■□ 3.4
SUGP1-211ENST00000590439 ATAD2BQ9ULI0 1458 aa36.26■■■■□ 3.4
SUGP1-211ENST00000590439 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
SUGP1-211ENST00000590439 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
SUGP1-211ENST00000590439 BAZ1AQ9NRL2 1556 aaPredicted RBP36.1■■■■□ 3.37
SUGP1-211ENST00000590439 ERCC6Q03468 1493 aa36■■■■□ 3.35
SUGP1-211ENST00000590439 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
SUGP1-211ENST00000590439 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
SUGP1-211ENST00000590439 CUX2O14529 1486 aa35.86■■■■□ 3.33
SUGP1-211ENST00000590439 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
SUGP1-211ENST00000590439 NESP48681 1621 aa35.83■■■■□ 3.33
SUGP1-211ENST00000590439 DNAJC5Q9H3Z4 198 aa35.72■■■■□ 3.31
SUGP1-211ENST00000590439 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
SUGP1-211ENST00000590439 WIZO95785 1651 aa35.47■■■■□ 3.27
SUGP1-211ENST00000590439 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
SUGP1-211ENST00000590439 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
SUGP1-211ENST00000590439 PDS5BQ9NTI5 1447 aa35.33■■■■□ 3.25
SUGP1-211ENST00000590439 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
SUGP1-211ENST00000590439 RSF1Q96T23 1441 aaPredicted RBP35.08■■■■□ 3.21
SUGP1-211ENST00000590439 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
SUGP1-211ENST00000590439 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
SUGP1-211ENST00000590439 WDR62O43379 1518 aa34.96■■■■□ 3.19
SUGP1-211ENST00000590439 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
SUGP1-211ENST00000590439 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
SUGP1-211ENST00000590439 CFTRP13569 1480 aa34.85■■■■□ 3.17
SUGP1-211ENST00000590439 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
SUGP1-211ENST00000590439 URB2Q14146 1524 aaKnown RBP34.6■■■■□ 3.13
SUGP1-211ENST00000590439 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
SUGP1-211ENST00000590439 TRIM41Q8WV44 630 aa34.29■■■■□ 3.08
SUGP1-211ENST00000590439 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
SUGP1-211ENST00000590439 OSCARQ8IYS5 282 aa34.22■■■■□ 3.07
SUGP1-211ENST00000590439 IFT140Q96RY7 1462 aa34.2■■■■□ 3.07
SUGP1-211ENST00000590439 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
SUGP1-211ENST00000590439 ABCC8Q09428 1581 aa34.14■■■■□ 3.06
SUGP1-211ENST00000590439 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
SUGP1-211ENST00000590439 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
SUGP1-211ENST00000590439 TARBP1Q13395 1621 aaKnown RBP33.93■■■■□ 3.02
SUGP1-211ENST00000590439 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
SUGP1-211ENST00000590439 AQRO60306 1485 aaKnown RBP eCLIP33.86■■■■□ 3.012e-6■■■■□ 23.4
SUGP1-211ENST00000590439 RIMBP3CA6NJZ7 1639 aa33.85■■■■□ 3.01
SUGP1-211ENST00000590439 RIMBP3BA6NNM3 1639 aa33.85■■■■□ 3.01
SUGP1-211ENST00000590439 RIMBP3Q9UFD9 1639 aa33.85■■■■□ 3.01
SUGP1-211ENST00000590439 CHD1O14646 1710 aa33.82■■■■□ 3
SUGP1-211ENST00000590439 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
SUGP1-211ENST00000590439 SOGA1O94964 1423 aa33.72■■■□□ 2.99
SUGP1-211ENST00000590439 ARHGEF11O15085 1522 aa33.71■■■□□ 2.99
SUGP1-211ENST00000590439 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
SUGP1-211ENST00000590439 CUX1P39880 1505 aa33.68■■■□□ 2.98
SUGP1-211ENST00000590439 FBLN2P98095 1184 aa33.67■■■□□ 2.98
SUGP1-211ENST00000590439 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
SUGP1-211ENST00000590439 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
SUGP1-211ENST00000590439 WDR97A6NE52 1622 aa33.57■■■□□ 2.97
SUGP1-211ENST00000590439 SNAPC4Q5SXM2 1469 aa33.54■■■□□ 2.96
SUGP1-211ENST00000590439 CYB5RLQ6IPT4 315 aa33.45■■■□□ 2.95
SUGP1-211ENST00000590439 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
SUGP1-211ENST00000590439 MAGI1Q96QZ7 1491 aaPredicted RBP33.42■■■□□ 2.94
SUGP1-211ENST00000590439 PBRM1Q86U86 1689 aa33.41■■■□□ 2.94
SUGP1-211ENST00000590439 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
SUGP1-211ENST00000590439 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
SUGP1-211ENST00000590439 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
SUGP1-211ENST00000590439 GAPVD1Q14C86 1478 aa33.33■■■□□ 2.93
SUGP1-211ENST00000590439 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
SUGP1-211ENST00000590439 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
SUGP1-211ENST00000590439 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
SUGP1-211ENST00000590439 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
SUGP1-211ENST00000590439 BIVM-ERCC5R4GMW8 1640 aa33.18■■■□□ 2.9
SUGP1-211ENST00000590439 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
SUGP1-211ENST00000590439 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
SUGP1-211ENST00000590439 TRHP20396 242 aaPredicted RBP33.1■■■□□ 2.89
SUGP1-211ENST00000590439 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
SUGP1-211ENST00000590439 GRIN2AQ12879 1464 aa33.01■■■□□ 2.88
SUGP1-211ENST00000590439 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
SUGP1-211ENST00000590439 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
SUGP1-211ENST00000590439 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
SUGP1-211ENST00000590439 NUP160Q12769 1436 aa32.86■■■□□ 2.85
SUGP1-211ENST00000590439 ERCC6L2Q5T890 1561 aa32.84■■■□□ 2.85
SUGP1-211ENST00000590439 SHROOM2Q13796 1616 aa32.75■■■□□ 2.83
SUGP1-211ENST00000590439 PRG4Q92954 1404 aaPredicted RBP32.57■■■□□ 2.8
SUGP1-211ENST00000590439 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
SUGP1-211ENST00000590439 JPH4Q96JJ6 628 aa32.52■■■□□ 2.8
SUGP1-211ENST00000590439 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms