RNA–Protein interactions for RNA: ENST00000590336.2

POLRMT-204, Transcript of RNA polymerase mitochondrial, humanhuman

TSL 3

Gene POLRMT, Length 380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMT-204ENST00000590336 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
POLRMT-204ENST00000590336 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
POLRMT-204ENST00000590336 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
POLRMT-204ENST00000590336 ABCC9O60706 1549 aa16.45■□□□□ 0.22
POLRMT-204ENST00000590336 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
POLRMT-204ENST00000590336 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
POLRMT-204ENST00000590336 NACADO15069 1562 aa16.2■□□□□ 0.18
POLRMT-204ENST00000590336 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
POLRMT-204ENST00000590336 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
POLRMT-204ENST00000590336 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
POLRMT-204ENST00000590336 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
POLRMT-204ENST00000590336 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
POLRMT-204ENST00000590336 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
POLRMT-204ENST00000590336 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
POLRMT-204ENST00000590336 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
POLRMT-204ENST00000590336 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
POLRMT-204ENST00000590336 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
POLRMT-204ENST00000590336 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
POLRMT-204ENST00000590336 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
POLRMT-204ENST00000590336 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
POLRMT-204ENST00000590336 WIZO95785 1651 aa15.09■□□□□ 0.01
POLRMT-204ENST00000590336 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
POLRMT-204ENST00000590336 SMARCA2P51531 1590 aa15.02■□□□□ -0
POLRMT-204ENST00000590336 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
POLRMT-204ENST00000590336 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
POLRMT-204ENST00000590336 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
POLRMT-204ENST00000590336 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
POLRMT-204ENST00000590336 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
POLRMT-204ENST00000590336 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
POLRMT-204ENST00000590336 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
POLRMT-204ENST00000590336 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
POLRMT-204ENST00000590336 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
POLRMT-204ENST00000590336 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
POLRMT-204ENST00000590336 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
POLRMT-204ENST00000590336 CFTRP13569 1480 aa14.48□□□□□ -0.09
POLRMT-204ENST00000590336 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
POLRMT-204ENST00000590336 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
POLRMT-204ENST00000590336 NESP48681 1621 aa14.37□□□□□ -0.11
POLRMT-204ENST00000590336 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
POLRMT-204ENST00000590336 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
POLRMT-204ENST00000590336 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
POLRMT-204ENST00000590336 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
POLRMT-204ENST00000590336 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
POLRMT-204ENST00000590336 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
POLRMT-204ENST00000590336 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
POLRMT-204ENST00000590336 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
POLRMT-204ENST00000590336 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
POLRMT-204ENST00000590336 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
POLRMT-204ENST00000590336 CUX1P39880 1505 aa14.2□□□□□ -0.14
POLRMT-204ENST00000590336 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
POLRMT-204ENST00000590336 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
POLRMT-204ENST00000590336 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
POLRMT-204ENST00000590336 MRC2Q9UBG0 1479 aa14.15□□□□□ -0.14
POLRMT-204ENST00000590336 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
POLRMT-204ENST00000590336 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
POLRMT-204ENST00000590336 WDR62O43379 1518 aa14.12□□□□□ -0.15
POLRMT-204ENST00000590336 WDR97A6NE52 1622 aa14.08□□□□□ -0.15
POLRMT-204ENST00000590336 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
POLRMT-204ENST00000590336 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
POLRMT-204ENST00000590336 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
POLRMT-204ENST00000590336 EEA1Q15075 1411 aa13.99□□□□□ -0.17
POLRMT-204ENST00000590336 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
POLRMT-204ENST00000590336 SOGA1O94964 1423 aa13.96□□□□□ -0.18
POLRMT-204ENST00000590336 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
POLRMT-204ENST00000590336 CUX2O14529 1486 aa13.94□□□□□ -0.18
POLRMT-204ENST00000590336 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
POLRMT-204ENST00000590336 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
POLRMT-204ENST00000590336 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
POLRMT-204ENST00000590336 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
POLRMT-204ENST00000590336 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
POLRMT-204ENST00000590336 CUL7Q14999 1698 aa13.88□□□□□ -0.19
POLRMT-204ENST00000590336 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
POLRMT-204ENST00000590336 KIF21BO75037 1637 aa13.87□□□□□ -0.19
POLRMT-204ENST00000590336 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
POLRMT-204ENST00000590336 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
POLRMT-204ENST00000590336 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
POLRMT-204ENST00000590336 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
POLRMT-204ENST00000590336 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
POLRMT-204ENST00000590336 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
POLRMT-204ENST00000590336 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
POLRMT-204ENST00000590336 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.216e-9■■■■□ 20.2
POLRMT-204ENST00000590336 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
POLRMT-204ENST00000590336 GOLGA3Q08378 1498 aa13.77□□□□□ -0.21
POLRMT-204ENST00000590336 PRXQ9BXM0 1461 aa13.77□□□□□ -0.21
POLRMT-204ENST00000590336 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
POLRMT-204ENST00000590336 IGF1RP08069 1367 aa13.75□□□□□ -0.21
POLRMT-204ENST00000590336 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
POLRMT-204ENST00000590336 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
POLRMT-204ENST00000590336 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.22
POLRMT-204ENST00000590336 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
POLRMT-204ENST00000590336 CHD1O14646 1710 aa13.69□□□□□ -0.22
POLRMT-204ENST00000590336 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
POLRMT-204ENST00000590336 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
POLRMT-204ENST00000590336 SYNJ2O15056 1496 aa13.65□□□□□ -0.22
POLRMT-204ENST00000590336 TNIKQ9UKE5 1360 aa13.63□□□□□ -0.23
POLRMT-204ENST00000590336 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
POLRMT-204ENST00000590336 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
POLRMT-204ENST00000590336 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
POLRMT-204ENST00000590336 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
POLRMT-204ENST00000590336 CEP170Q5SW79 1584 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms