RNA–Protein interactions for RNA: ENST00000590274.1

AC011477.4-201, humanhuman

TSL 3 BASIC

Gene AC011477.4, Length 609 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011477.4-201ENST00000590274 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
AC011477.4-201ENST00000590274 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
AC011477.4-201ENST00000590274 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
AC011477.4-201ENST00000590274 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
AC011477.4-201ENST00000590274 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
AC011477.4-201ENST00000590274 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
AC011477.4-201ENST00000590274 FOXD1Q16676 465 aa23.74■■□□□ 1.39
AC011477.4-201ENST00000590274 ABCC9O60706 1549 aa23.56■■□□□ 1.36
AC011477.4-201ENST00000590274 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
AC011477.4-201ENST00000590274 NACADO15069 1562 aa22.71■■□□□ 1.23
AC011477.4-201ENST00000590274 POTEDQ86YR6 584 aa22.69■■□□□ 1.22
AC011477.4-201ENST00000590274 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
AC011477.4-201ENST00000590274 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
AC011477.4-201ENST00000590274 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
AC011477.4-201ENST00000590274 MSH5O43196 834 aa22.52■■□□□ 1.2
AC011477.4-201ENST00000590274 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
AC011477.4-201ENST00000590274 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
AC011477.4-201ENST00000590274 PIAS4Q8N2W9 510 aaPredicted RBP22.1■■□□□ 1.13
AC011477.4-201ENST00000590274 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
AC011477.4-201ENST00000590274 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
AC011477.4-201ENST00000590274 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
AC011477.4-201ENST00000590274 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
AC011477.4-201ENST00000590274 SHROOM4Q9ULL8 1493 aa21.86■■□□□ 1.09
AC011477.4-201ENST00000590274 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
AC011477.4-201ENST00000590274 ADRA2BP18089 450 aa21.69■■□□□ 1.06
AC011477.4-201ENST00000590274 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
AC011477.4-201ENST00000590274 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
AC011477.4-201ENST00000590274 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
AC011477.4-201ENST00000590274 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
AC011477.4-201ENST00000590274 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
AC011477.4-201ENST00000590274 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
AC011477.4-201ENST00000590274 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
AC011477.4-201ENST00000590274 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
AC011477.4-201ENST00000590274 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
AC011477.4-201ENST00000590274 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
AC011477.4-201ENST00000590274 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
AC011477.4-201ENST00000590274 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
AC011477.4-201ENST00000590274 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
AC011477.4-201ENST00000590274 WIZO95785 1651 aa20.69■□□□□ 0.9
AC011477.4-201ENST00000590274 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
AC011477.4-201ENST00000590274 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
AC011477.4-201ENST00000590274 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
AC011477.4-201ENST00000590274 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
AC011477.4-201ENST00000590274 NESP48681 1621 aa20.36■□□□□ 0.85
AC011477.4-201ENST00000590274 CADPSQ9ULU8 1353 aa20.3■□□□□ 0.84
AC011477.4-201ENST00000590274 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
AC011477.4-201ENST00000590274 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
AC011477.4-201ENST00000590274 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
AC011477.4-201ENST00000590274 CFTRP13569 1480 aa20.18■□□□□ 0.82
AC011477.4-201ENST00000590274 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
AC011477.4-201ENST00000590274 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
AC011477.4-201ENST00000590274 CUX2O14529 1486 aa20.12■□□□□ 0.81
AC011477.4-201ENST00000590274 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
AC011477.4-201ENST00000590274 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
AC011477.4-201ENST00000590274 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
AC011477.4-201ENST00000590274 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
AC011477.4-201ENST00000590274 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
AC011477.4-201ENST00000590274 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
AC011477.4-201ENST00000590274 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
AC011477.4-201ENST00000590274 WDR62O43379 1518 aa19.97■□□□□ 0.79
AC011477.4-201ENST00000590274 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
AC011477.4-201ENST00000590274 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
AC011477.4-201ENST00000590274 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
AC011477.4-201ENST00000590274 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
AC011477.4-201ENST00000590274 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
AC011477.4-201ENST00000590274 CUX1P39880 1505 aa19.61■□□□□ 0.73
AC011477.4-201ENST00000590274 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
AC011477.4-201ENST00000590274 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
AC011477.4-201ENST00000590274 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
AC011477.4-201ENST00000590274 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
AC011477.4-201ENST00000590274 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
AC011477.4-201ENST00000590274 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
AC011477.4-201ENST00000590274 SOGA1O94964 1423 aa19.51■□□□□ 0.71
AC011477.4-201ENST00000590274 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
AC011477.4-201ENST00000590274 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
AC011477.4-201ENST00000590274 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
AC011477.4-201ENST00000590274 WDR97A6NE52 1622 aa19.48■□□□□ 0.71
AC011477.4-201ENST00000590274 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
AC011477.4-201ENST00000590274 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
AC011477.4-201ENST00000590274 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
AC011477.4-201ENST00000590274 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
AC011477.4-201ENST00000590274 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
AC011477.4-201ENST00000590274 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
AC011477.4-201ENST00000590274 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
AC011477.4-201ENST00000590274 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
AC011477.4-201ENST00000590274 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
AC011477.4-201ENST00000590274 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
AC011477.4-201ENST00000590274 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
AC011477.4-201ENST00000590274 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
AC011477.4-201ENST00000590274 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
AC011477.4-201ENST00000590274 CHD1O14646 1710 aa19.25■□□□□ 0.67
AC011477.4-201ENST00000590274 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
AC011477.4-201ENST00000590274 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
AC011477.4-201ENST00000590274 FBLN2P98095 1184 aa19.21■□□□□ 0.67
AC011477.4-201ENST00000590274 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
AC011477.4-201ENST00000590274 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
AC011477.4-201ENST00000590274 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
AC011477.4-201ENST00000590274 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
AC011477.4-201ENST00000590274 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
AC011477.4-201ENST00000590274 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms