RNA–Protein interactions for RNA: ENST00000590135.5

U2AF1L4-213, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 2

Gene U2AF1L4, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-213ENST00000590135 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
U2AF1L4-213ENST00000590135 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
U2AF1L4-213ENST00000590135 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
U2AF1L4-213ENST00000590135 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
U2AF1L4-213ENST00000590135 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
U2AF1L4-213ENST00000590135 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
U2AF1L4-213ENST00000590135 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
U2AF1L4-213ENST00000590135 FOXD1Q16676 465 aa22.14■■□□□ 1.13
U2AF1L4-213ENST00000590135 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
U2AF1L4-213ENST00000590135 ADRA2BP18089 450 aa21.7■■□□□ 1.06
U2AF1L4-213ENST00000590135 PPP6R1Q9UPN7 881 aa21.66■■□□□ 1.06
U2AF1L4-213ENST00000590135 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
U2AF1L4-213ENST00000590135 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
U2AF1L4-213ENST00000590135 PIAS4Q8N2W9 510 aaPredicted RBP21.08■□□□□ 0.96
U2AF1L4-213ENST00000590135 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
U2AF1L4-213ENST00000590135 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
U2AF1L4-213ENST00000590135 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
U2AF1L4-213ENST00000590135 NACADO15069 1562 aa20.57■□□□□ 0.88
U2AF1L4-213ENST00000590135 ABCC9O60706 1549 aa20.47■□□□□ 0.87
U2AF1L4-213ENST00000590135 KCNA4P22459 653 aa20.46■□□□□ 0.87
U2AF1L4-213ENST00000590135 PPP4R3CPQ6ZMV5 832 aa20.42■□□□□ 0.86
U2AF1L4-213ENST00000590135 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
U2AF1L4-213ENST00000590135 MSH5O43196 834 aa20.34■□□□□ 0.85
U2AF1L4-213ENST00000590135 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
U2AF1L4-213ENST00000590135 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
U2AF1L4-213ENST00000590135 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
U2AF1L4-213ENST00000590135 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
U2AF1L4-213ENST00000590135 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
U2AF1L4-213ENST00000590135 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
U2AF1L4-213ENST00000590135 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
U2AF1L4-213ENST00000590135 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
U2AF1L4-213ENST00000590135 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
U2AF1L4-213ENST00000590135 NPM3O75607 178 aaKnown RBP19.7■□□□□ 0.74
U2AF1L4-213ENST00000590135 WIZO95785 1651 aa19.67■□□□□ 0.74
U2AF1L4-213ENST00000590135 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
U2AF1L4-213ENST00000590135 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
U2AF1L4-213ENST00000590135 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
U2AF1L4-213ENST00000590135 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
U2AF1L4-213ENST00000590135 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
U2AF1L4-213ENST00000590135 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.71
U2AF1L4-213ENST00000590135 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
U2AF1L4-213ENST00000590135 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
U2AF1L4-213ENST00000590135 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
U2AF1L4-213ENST00000590135 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
U2AF1L4-213ENST00000590135 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
U2AF1L4-213ENST00000590135 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
U2AF1L4-213ENST00000590135 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
U2AF1L4-213ENST00000590135 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
U2AF1L4-213ENST00000590135 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
U2AF1L4-213ENST00000590135 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
U2AF1L4-213ENST00000590135 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
U2AF1L4-213ENST00000590135 EEA1Q15075 1411 aa19.11■□□□□ 0.65
U2AF1L4-213ENST00000590135 HRCP23327 699 aa19.1■□□□□ 0.65
U2AF1L4-213ENST00000590135 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
U2AF1L4-213ENST00000590135 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
U2AF1L4-213ENST00000590135 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
U2AF1L4-213ENST00000590135 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
U2AF1L4-213ENST00000590135 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
U2AF1L4-213ENST00000590135 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
U2AF1L4-213ENST00000590135 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
U2AF1L4-213ENST00000590135 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
U2AF1L4-213ENST00000590135 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
U2AF1L4-213ENST00000590135 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
U2AF1L4-213ENST00000590135 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
U2AF1L4-213ENST00000590135 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
U2AF1L4-213ENST00000590135 SOGA1O94964 1423 aa18.81■□□□□ 0.6
U2AF1L4-213ENST00000590135 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
U2AF1L4-213ENST00000590135 KIF21BO75037 1637 aa18.77■□□□□ 0.6
U2AF1L4-213ENST00000590135 ZBTB22O15209 634 aa18.77■□□□□ 0.6
U2AF1L4-213ENST00000590135 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
U2AF1L4-213ENST00000590135 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
U2AF1L4-213ENST00000590135 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
U2AF1L4-213ENST00000590135 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
U2AF1L4-213ENST00000590135 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
U2AF1L4-213ENST00000590135 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
U2AF1L4-213ENST00000590135 CFTRP13569 1480 aa18.67■□□□□ 0.58
U2AF1L4-213ENST00000590135 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
U2AF1L4-213ENST00000590135 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
U2AF1L4-213ENST00000590135 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
U2AF1L4-213ENST00000590135 UBTFP17480 764 aaKnown RBP18.54■□□□□ 0.56
U2AF1L4-213ENST00000590135 CUX1P39880 1505 aa18.52■□□□□ 0.55
U2AF1L4-213ENST00000590135 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
U2AF1L4-213ENST00000590135 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
U2AF1L4-213ENST00000590135 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
U2AF1L4-213ENST00000590135 CLIP1P30622 1438 aa18.45■□□□□ 0.54
U2AF1L4-213ENST00000590135 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
U2AF1L4-213ENST00000590135 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
U2AF1L4-213ENST00000590135 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
U2AF1L4-213ENST00000590135 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
U2AF1L4-213ENST00000590135 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
U2AF1L4-213ENST00000590135 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
U2AF1L4-213ENST00000590135 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.51
U2AF1L4-213ENST00000590135 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
U2AF1L4-213ENST00000590135 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
U2AF1L4-213ENST00000590135 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
U2AF1L4-213ENST00000590135 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
U2AF1L4-213ENST00000590135 APLP2Q06481 763 aa18.21■□□□□ 0.51
U2AF1L4-213ENST00000590135 CUX2O14529 1486 aa18.21■□□□□ 0.5
U2AF1L4-213ENST00000590135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
U2AF1L4-213ENST00000590135 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms