RNA–Protein interactions for RNA: ENST00000589429.5

U2AF1L4-212, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 4

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-212ENST00000589429 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
U2AF1L4-212ENST00000589429 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
U2AF1L4-212ENST00000589429 ABCC9O60706 1549 aa33.42■■■□□ 2.94
U2AF1L4-212ENST00000589429 RB1CC1Q8TDY2 1594 aa31.99■■■□□ 2.71
U2AF1L4-212ENST00000589429 NACADO15069 1562 aa31.94■■■□□ 2.7
U2AF1L4-212ENST00000589429 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
U2AF1L4-212ENST00000589429 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
U2AF1L4-212ENST00000589429 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
U2AF1L4-212ENST00000589429 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
U2AF1L4-212ENST00000589429 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
U2AF1L4-212ENST00000589429 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
U2AF1L4-212ENST00000589429 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
U2AF1L4-212ENST00000589429 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
U2AF1L4-212ENST00000589429 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
U2AF1L4-212ENST00000589429 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
U2AF1L4-212ENST00000589429 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
U2AF1L4-212ENST00000589429 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
U2AF1L4-212ENST00000589429 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
U2AF1L4-212ENST00000589429 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
U2AF1L4-212ENST00000589429 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
U2AF1L4-212ENST00000589429 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
U2AF1L4-212ENST00000589429 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
U2AF1L4-212ENST00000589429 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
U2AF1L4-212ENST00000589429 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
U2AF1L4-212ENST00000589429 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
U2AF1L4-212ENST00000589429 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
U2AF1L4-212ENST00000589429 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
U2AF1L4-212ENST00000589429 WIZO95785 1651 aa29.09■■■□□ 2.25
U2AF1L4-212ENST00000589429 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
U2AF1L4-212ENST00000589429 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
U2AF1L4-212ENST00000589429 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
U2AF1L4-212ENST00000589429 NESP48681 1621 aa28.76■■■□□ 2.2
U2AF1L4-212ENST00000589429 LAMC3Q9Y6N6 1575 aa28.72■■■□□ 2.19
U2AF1L4-212ENST00000589429 CUX2O14529 1486 aa28.62■■■□□ 2.17
U2AF1L4-212ENST00000589429 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
U2AF1L4-212ENST00000589429 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
U2AF1L4-212ENST00000589429 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
U2AF1L4-212ENST00000589429 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
U2AF1L4-212ENST00000589429 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
U2AF1L4-212ENST00000589429 CFTRP13569 1480 aa28.39■■■□□ 2.13
U2AF1L4-212ENST00000589429 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
U2AF1L4-212ENST00000589429 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
U2AF1L4-212ENST00000589429 DNAJC5Q9H3Z4 198 aa28.33■■■□□ 2.13
U2AF1L4-212ENST00000589429 FANCD2Q9BXW9 1451 aa28.22■■■□□ 2.11
U2AF1L4-212ENST00000589429 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
U2AF1L4-212ENST00000589429 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
U2AF1L4-212ENST00000589429 WDR62O43379 1518 aa28.15■■■□□ 2.1
U2AF1L4-212ENST00000589429 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
U2AF1L4-212ENST00000589429 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
U2AF1L4-212ENST00000589429 TOPBP1Q92547 1522 aa27.79■■■□□ 2.04
U2AF1L4-212ENST00000589429 ABCC8Q09428 1581 aa27.78■■■□□ 2.04
U2AF1L4-212ENST00000589429 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
U2AF1L4-212ENST00000589429 CUX1P39880 1505 aa27.57■■■□□ 2
U2AF1L4-212ENST00000589429 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
U2AF1L4-212ENST00000589429 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
U2AF1L4-212ENST00000589429 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
U2AF1L4-212ENST00000589429 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
U2AF1L4-212ENST00000589429 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
U2AF1L4-212ENST00000589429 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
U2AF1L4-212ENST00000589429 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
U2AF1L4-212ENST00000589429 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
U2AF1L4-212ENST00000589429 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
U2AF1L4-212ENST00000589429 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
U2AF1L4-212ENST00000589429 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
U2AF1L4-212ENST00000589429 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
U2AF1L4-212ENST00000589429 SOGA1O94964 1423 aa27.33■■□□□ 1.97
U2AF1L4-212ENST00000589429 TRIM41Q8WV44 630 aa27.31■■□□□ 1.96
U2AF1L4-212ENST00000589429 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.96
U2AF1L4-212ENST00000589429 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
U2AF1L4-212ENST00000589429 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
U2AF1L4-212ENST00000589429 PBRM1Q86U86 1689 aa27.2■■□□□ 1.94
U2AF1L4-212ENST00000589429 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
U2AF1L4-212ENST00000589429 CHD1O14646 1710 aa27.15■■□□□ 1.94
U2AF1L4-212ENST00000589429 FBLN2P98095 1184 aa27.12■■□□□ 1.93
U2AF1L4-212ENST00000589429 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
U2AF1L4-212ENST00000589429 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
U2AF1L4-212ENST00000589429 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
U2AF1L4-212ENST00000589429 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
U2AF1L4-212ENST00000589429 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
U2AF1L4-212ENST00000589429 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
U2AF1L4-212ENST00000589429 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
U2AF1L4-212ENST00000589429 ADAMTS12P58397 1594 aa26.95■■□□□ 1.9
U2AF1L4-212ENST00000589429 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
U2AF1L4-212ENST00000589429 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
U2AF1L4-212ENST00000589429 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
U2AF1L4-212ENST00000589429 CHMP7Q8WUX9 453 aaPredicted RBP26.92■■□□□ 1.9
U2AF1L4-212ENST00000589429 CLASP1Q7Z460 1538 aa26.82■■□□□ 1.88
U2AF1L4-212ENST00000589429 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
U2AF1L4-212ENST00000589429 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
U2AF1L4-212ENST00000589429 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
U2AF1L4-212ENST00000589429 KIF27Q86VH2 1401 aa26.77■■□□□ 1.88
U2AF1L4-212ENST00000589429 CUL7Q14999 1698 aa26.75■■□□□ 1.87
U2AF1L4-212ENST00000589429 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
U2AF1L4-212ENST00000589429 ARAP1Q96P48 1450 aa26.7■■□□□ 1.87
U2AF1L4-212ENST00000589429 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
U2AF1L4-212ENST00000589429 NUP160Q12769 1436 aa26.66■■□□□ 1.86
U2AF1L4-212ENST00000589429 IGF1RP08069 1367 aa26.59■■□□□ 1.85
U2AF1L4-212ENST00000589429 RUSC2Q8N2Y8 1516 aa26.56■■□□□ 1.84
U2AF1L4-212ENST00000589429 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
U2AF1L4-212ENST00000589429 EEA1Q15075 1411 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms