RNA–Protein interactions for RNA: ENST00000589247.1

YIF1B-211, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1B, Length 734 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-211ENST00000589247 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
YIF1B-211ENST00000589247 ABCC9O60706 1549 aa32.6■■■□□ 2.81
YIF1B-211ENST00000589247 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
YIF1B-211ENST00000589247 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
YIF1B-211ENST00000589247 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
YIF1B-211ENST00000589247 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
YIF1B-211ENST00000589247 NACADO15069 1562 aa30.16■■■□□ 2.42
YIF1B-211ENST00000589247 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
YIF1B-211ENST00000589247 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
YIF1B-211ENST00000589247 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
YIF1B-211ENST00000589247 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
YIF1B-211ENST00000589247 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
YIF1B-211ENST00000589247 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
YIF1B-211ENST00000589247 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
YIF1B-211ENST00000589247 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
YIF1B-211ENST00000589247 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
YIF1B-211ENST00000589247 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
YIF1B-211ENST00000589247 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
YIF1B-211ENST00000589247 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
YIF1B-211ENST00000589247 CUX2O14529 1486 aa28.5■■■□□ 2.15
YIF1B-211ENST00000589247 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
YIF1B-211ENST00000589247 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
YIF1B-211ENST00000589247 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
YIF1B-211ENST00000589247 NESP48681 1621 aa27.76■■■□□ 2.03
YIF1B-211ENST00000589247 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
YIF1B-211ENST00000589247 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
YIF1B-211ENST00000589247 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
YIF1B-211ENST00000589247 SMARCA2P51531 1590 aa27.49■■□□□ 1.99
YIF1B-211ENST00000589247 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
YIF1B-211ENST00000589247 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
YIF1B-211ENST00000589247 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
YIF1B-211ENST00000589247 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
YIF1B-211ENST00000589247 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
YIF1B-211ENST00000589247 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
YIF1B-211ENST00000589247 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
YIF1B-211ENST00000589247 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
YIF1B-211ENST00000589247 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
YIF1B-211ENST00000589247 WDR62O43379 1518 aa27.07■■□□□ 1.92
YIF1B-211ENST00000589247 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
YIF1B-211ENST00000589247 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
YIF1B-211ENST00000589247 WIZO95785 1651 aa26.97■■□□□ 1.91
YIF1B-211ENST00000589247 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
YIF1B-211ENST00000589247 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
YIF1B-211ENST00000589247 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
YIF1B-211ENST00000589247 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
YIF1B-211ENST00000589247 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
YIF1B-211ENST00000589247 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
YIF1B-211ENST00000589247 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.87
YIF1B-211ENST00000589247 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
YIF1B-211ENST00000589247 ARHGEF11O15085 1522 aa26.62■■□□□ 1.85
YIF1B-211ENST00000589247 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
YIF1B-211ENST00000589247 CFTRP13569 1480 aa26.46■■□□□ 1.83
YIF1B-211ENST00000589247 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
YIF1B-211ENST00000589247 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
YIF1B-211ENST00000589247 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
YIF1B-211ENST00000589247 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
YIF1B-211ENST00000589247 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
YIF1B-211ENST00000589247 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
YIF1B-211ENST00000589247 IFT140Q96RY7 1462 aa26.26■■□□□ 1.79
YIF1B-211ENST00000589247 CHD1O14646 1710 aa26.17■■□□□ 1.78
YIF1B-211ENST00000589247 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
YIF1B-211ENST00000589247 PRDM2Q13029 1718 aa26.15■■□□□ 1.78
YIF1B-211ENST00000589247 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
YIF1B-211ENST00000589247 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.751e-7■■■□□ 18.6
YIF1B-211ENST00000589247 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
YIF1B-211ENST00000589247 FBLN2P98095 1184 aa25.92■■□□□ 1.74
YIF1B-211ENST00000589247 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
YIF1B-211ENST00000589247 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
YIF1B-211ENST00000589247 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
YIF1B-211ENST00000589247 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
YIF1B-211ENST00000589247 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
YIF1B-211ENST00000589247 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
YIF1B-211ENST00000589247 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
YIF1B-211ENST00000589247 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
YIF1B-211ENST00000589247 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
YIF1B-211ENST00000589247 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
YIF1B-211ENST00000589247 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
YIF1B-211ENST00000589247 MAGI1Q96QZ7 1491 aaPredicted RBP25.56■■□□□ 1.68
YIF1B-211ENST00000589247 SOGA1O94964 1423 aa25.55■■□□□ 1.68
YIF1B-211ENST00000589247 CUX1P39880 1505 aa25.53■■□□□ 1.68
YIF1B-211ENST00000589247 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
YIF1B-211ENST00000589247 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
YIF1B-211ENST00000589247 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
YIF1B-211ENST00000589247 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
YIF1B-211ENST00000589247 ILDR1Q86SU0 546 aaPredicted RBP25.41■■□□□ 1.66
YIF1B-211ENST00000589247 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
YIF1B-211ENST00000589247 BIVM-ERCC5R4GMW8 1640 aa25.38■■□□□ 1.65
YIF1B-211ENST00000589247 ERCC6L2Q5T890 1561 aa25.38■■□□□ 1.65
YIF1B-211ENST00000589247 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
YIF1B-211ENST00000589247 PBRM1Q86U86 1689 aa25.33■■□□□ 1.65
YIF1B-211ENST00000589247 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
YIF1B-211ENST00000589247 KDM4FA0A1W2PPD8 638 aa25.19■■□□□ 1.62
YIF1B-211ENST00000589247 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
YIF1B-211ENST00000589247 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
YIF1B-211ENST00000589247 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
YIF1B-211ENST00000589247 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
YIF1B-211ENST00000589247 NUP160Q12769 1436 aa25.12■■□□□ 1.61
YIF1B-211ENST00000589247 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
YIF1B-211ENST00000589247 ABCC10Q5T3U5 1492 aa25.05■■□□□ 1.6
YIF1B-211ENST00000589247 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms