RNA–Protein interactions for RNA: ENST00000589218.5

HKR1-212, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 3

Gene HKR1, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-212ENST00000589218 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
HKR1-212ENST00000589218 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
HKR1-212ENST00000589218 ABCC9O60706 1549 aa31.56■■■□□ 2.64
HKR1-212ENST00000589218 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
HKR1-212ENST00000589218 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
HKR1-212ENST00000589218 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
HKR1-212ENST00000589218 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
HKR1-212ENST00000589218 NACADO15069 1562 aa30.75■■■□□ 2.51
HKR1-212ENST00000589218 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
HKR1-212ENST00000589218 SCRIBQ14160 1630 aa30■■■□□ 2.39
HKR1-212ENST00000589218 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
HKR1-212ENST00000589218 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
HKR1-212ENST00000589218 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
HKR1-212ENST00000589218 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
HKR1-212ENST00000589218 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
HKR1-212ENST00000589218 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
HKR1-212ENST00000589218 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
HKR1-212ENST00000589218 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
HKR1-212ENST00000589218 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
HKR1-212ENST00000589218 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
HKR1-212ENST00000589218 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
HKR1-212ENST00000589218 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
HKR1-212ENST00000589218 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
HKR1-212ENST00000589218 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
HKR1-212ENST00000589218 SMARCA2P51531 1590 aa28.47■■■□□ 2.15
HKR1-212ENST00000589218 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
HKR1-212ENST00000589218 WIZO95785 1651 aa28.42■■■□□ 2.14
HKR1-212ENST00000589218 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
HKR1-212ENST00000589218 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
HKR1-212ENST00000589218 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
HKR1-212ENST00000589218 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
HKR1-212ENST00000589218 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.05
HKR1-212ENST00000589218 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
HKR1-212ENST00000589218 CFTRP13569 1480 aa27.56■■■□□ 2
HKR1-212ENST00000589218 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
HKR1-212ENST00000589218 NESP48681 1621 aa27.49■■□□□ 1.99
HKR1-212ENST00000589218 PDS5BQ9NTI5 1447 aa27.35■■□□□ 1.97
HKR1-212ENST00000589218 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
HKR1-212ENST00000589218 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
HKR1-212ENST00000589218 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
HKR1-212ENST00000589218 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
HKR1-212ENST00000589218 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
HKR1-212ENST00000589218 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
HKR1-212ENST00000589218 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
HKR1-212ENST00000589218 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
HKR1-212ENST00000589218 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
HKR1-212ENST00000589218 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
HKR1-212ENST00000589218 CUX1P39880 1505 aa26.91■■□□□ 1.9
HKR1-212ENST00000589218 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
HKR1-212ENST00000589218 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
HKR1-212ENST00000589218 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
HKR1-212ENST00000589218 WDR62O43379 1518 aa26.87■■□□□ 1.89
HKR1-212ENST00000589218 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
HKR1-212ENST00000589218 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
HKR1-212ENST00000589218 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
HKR1-212ENST00000589218 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
HKR1-212ENST00000589218 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
HKR1-212ENST00000589218 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
HKR1-212ENST00000589218 SOGA1O94964 1423 aa26.65■■□□□ 1.86
HKR1-212ENST00000589218 CUX2O14529 1486 aa26.65■■□□□ 1.86
HKR1-212ENST00000589218 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
HKR1-212ENST00000589218 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
HKR1-212ENST00000589218 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
HKR1-212ENST00000589218 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
HKR1-212ENST00000589218 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
HKR1-212ENST00000589218 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
HKR1-212ENST00000589218 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
HKR1-212ENST00000589218 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
HKR1-212ENST00000589218 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
HKR1-212ENST00000589218 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
HKR1-212ENST00000589218 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
HKR1-212ENST00000589218 EEA1Q15075 1411 aa26.32■■□□□ 1.8
HKR1-212ENST00000589218 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
HKR1-212ENST00000589218 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
HKR1-212ENST00000589218 FAM9AQ8IZU1 332 aaPredicted RBP26.27■■□□□ 1.8
HKR1-212ENST00000589218 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
HKR1-212ENST00000589218 IGF1RP08069 1367 aa26.24■■□□□ 1.79
HKR1-212ENST00000589218 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
HKR1-212ENST00000589218 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.79
HKR1-212ENST00000589218 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
HKR1-212ENST00000589218 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
HKR1-212ENST00000589218 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
HKR1-212ENST00000589218 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
HKR1-212ENST00000589218 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
HKR1-212ENST00000589218 CUL7Q14999 1698 aa26.05■■□□□ 1.76
HKR1-212ENST00000589218 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
HKR1-212ENST00000589218 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
HKR1-212ENST00000589218 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
HKR1-212ENST00000589218 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
HKR1-212ENST00000589218 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
HKR1-212ENST00000589218 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
HKR1-212ENST00000589218 FBLN2P98095 1184 aa25.95■■□□□ 1.74
HKR1-212ENST00000589218 KIF21BO75037 1637 aa25.94■■□□□ 1.74
HKR1-212ENST00000589218 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
HKR1-212ENST00000589218 GOLGA3Q08378 1498 aa25.88■■□□□ 1.73
HKR1-212ENST00000589218 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
HKR1-212ENST00000589218 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
HKR1-212ENST00000589218 UBTFP17480 764 aaKnown RBP25.81■■□□□ 1.72
HKR1-212ENST00000589218 CHD1O14646 1710 aa25.8■■□□□ 1.72
HKR1-212ENST00000589218 NUP160Q12769 1436 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms