RNA–Protein interactions for RNA: ENST00000589159.5

CDIP1-213, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-213ENST00000589159 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
CDIP1-213ENST00000589159 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
CDIP1-213ENST00000589159 ABCC9O60706 1549 aa26.52■■□□□ 1.84
CDIP1-213ENST00000589159 RB1CC1Q8TDY2 1594 aa25.67■■□□□ 1.7
CDIP1-213ENST00000589159 NACADO15069 1562 aa25.66■■□□□ 1.7
CDIP1-213ENST00000589159 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
CDIP1-213ENST00000589159 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
CDIP1-213ENST00000589159 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
CDIP1-213ENST00000589159 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
CDIP1-213ENST00000589159 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
CDIP1-213ENST00000589159 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
CDIP1-213ENST00000589159 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
CDIP1-213ENST00000589159 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
CDIP1-213ENST00000589159 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
CDIP1-213ENST00000589159 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
CDIP1-213ENST00000589159 EIF4G1Q04637 1599 aaKnown RBP24.19■■□□□ 1.46
CDIP1-213ENST00000589159 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
CDIP1-213ENST00000589159 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
CDIP1-213ENST00000589159 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
CDIP1-213ENST00000589159 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
CDIP1-213ENST00000589159 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
CDIP1-213ENST00000589159 NCAPD3P42695 1498 aa23.64■■□□□ 1.38
CDIP1-213ENST00000589159 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
CDIP1-213ENST00000589159 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
CDIP1-213ENST00000589159 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
CDIP1-213ENST00000589159 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
CDIP1-213ENST00000589159 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
CDIP1-213ENST00000589159 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
CDIP1-213ENST00000589159 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
CDIP1-213ENST00000589159 WIZO95785 1651 aa23.25■■□□□ 1.31
CDIP1-213ENST00000589159 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
CDIP1-213ENST00000589159 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
CDIP1-213ENST00000589159 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
CDIP1-213ENST00000589159 NESP48681 1621 aa22.93■■□□□ 1.26
CDIP1-213ENST00000589159 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
CDIP1-213ENST00000589159 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
CDIP1-213ENST00000589159 CUX2O14529 1486 aa22.85■■□□□ 1.25
CDIP1-213ENST00000589159 CFTRP13569 1480 aa22.81■■□□□ 1.24
CDIP1-213ENST00000589159 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
CDIP1-213ENST00000589159 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
CDIP1-213ENST00000589159 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
CDIP1-213ENST00000589159 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
CDIP1-213ENST00000589159 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
CDIP1-213ENST00000589159 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
CDIP1-213ENST00000589159 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
CDIP1-213ENST00000589159 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
CDIP1-213ENST00000589159 WDR62O43379 1518 aa22.57■■□□□ 1.2
CDIP1-213ENST00000589159 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
CDIP1-213ENST00000589159 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
CDIP1-213ENST00000589159 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
CDIP1-213ENST00000589159 DNMBPQ6XZF7 1577 aa22.3■■□□□ 1.16
CDIP1-213ENST00000589159 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
CDIP1-213ENST00000589159 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
CDIP1-213ENST00000589159 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
CDIP1-213ENST00000589159 CUX1P39880 1505 aa22.1■■□□□ 1.13
CDIP1-213ENST00000589159 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
CDIP1-213ENST00000589159 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
CDIP1-213ENST00000589159 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
CDIP1-213ENST00000589159 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
CDIP1-213ENST00000589159 SOGA1O94964 1423 aa21.98■■□□□ 1.11
CDIP1-213ENST00000589159 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
CDIP1-213ENST00000589159 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
CDIP1-213ENST00000589159 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
CDIP1-213ENST00000589159 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
CDIP1-213ENST00000589159 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
CDIP1-213ENST00000589159 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
CDIP1-213ENST00000589159 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
CDIP1-213ENST00000589159 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
CDIP1-213ENST00000589159 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
CDIP1-213ENST00000589159 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
CDIP1-213ENST00000589159 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
CDIP1-213ENST00000589159 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
CDIP1-213ENST00000589159 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.08
CDIP1-213ENST00000589159 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
CDIP1-213ENST00000589159 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
CDIP1-213ENST00000589159 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
CDIP1-213ENST00000589159 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
CDIP1-213ENST00000589159 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
CDIP1-213ENST00000589159 CHD1O14646 1710 aa21.64■■□□□ 1.06
CDIP1-213ENST00000589159 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
CDIP1-213ENST00000589159 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
CDIP1-213ENST00000589159 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
CDIP1-213ENST00000589159 FBLN2P98095 1184 aa21.55■■□□□ 1.04
CDIP1-213ENST00000589159 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
CDIP1-213ENST00000589159 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
CDIP1-213ENST00000589159 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
CDIP1-213ENST00000589159 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
CDIP1-213ENST00000589159 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
CDIP1-213ENST00000589159 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
CDIP1-213ENST00000589159 CUL7Q14999 1698 aa21.46■■□□□ 1.03
CDIP1-213ENST00000589159 NUP160Q12769 1436 aa21.41■■□□□ 1.02
CDIP1-213ENST00000589159 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
CDIP1-213ENST00000589159 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
CDIP1-213ENST00000589159 IGF1RP08069 1367 aa21.39■■□□□ 1.02
CDIP1-213ENST00000589159 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
CDIP1-213ENST00000589159 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
CDIP1-213ENST00000589159 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
CDIP1-213ENST00000589159 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
CDIP1-213ENST00000589159 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
CDIP1-213ENST00000589159 EEA1Q15075 1411 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms