RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.72□□□□□ -0.211e-17■□□□□ 8.5
NFIC-206ENST00000589123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.44e-13■■■■□ 26.2
NFIC-206ENST00000589123 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.213e-10■■■□□ 14.6
NFIC-206ENST00000589123 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.416e-10■■■■□ 19.3
NFIC-206ENST00000589123 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.37■□□□□ 0.219e-10■■■■■ 60.1
NFIC-206ENST00000589123 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.24■□□□□ 0.033e-9■■■■■ 78.5
NFIC-206ENST00000589123 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.182e-8■■■□□ 16.1
NFIC-206ENST00000589123 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.212e-8■■■■□ 21.2
NFIC-206ENST00000589123 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.112e-8■□□□□ 11.2
NFIC-206ENST00000589123 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.93□□□□□ -0.183e-8■■■■■ 27.6
NFIC-206ENST00000589123 DDX3XO00571 662 aaKnown RBP eCLIP14□□□□□ -0.173e-8■□□□□ 11.2
NFIC-206ENST00000589123 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.154e-8■■□□□ 12.2
NFIC-206ENST00000589123 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.235e-8■■■■■ 31.2
NFIC-206ENST00000589123 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.339e-8■■■■■ 40.4
NFIC-206ENST00000589123 ZC3H11AO75152 810 aaKnown RBP eCLIP14.37□□□□□ -0.119e-8■■■■□ 24.3
NFIC-206ENST00000589123 PCBP2Q15366 365 aaKnown RBP eCLIP13.74□□□□□ -0.211e-7■■■■■ 44.1
NFIC-206ENST00000589123 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.181e-7■■■■■ 38.5
NFIC-206ENST00000589123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.091e-7■■■■□ 21.7
NFIC-206ENST00000589123 TIA1P31483 386 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■■□□□ 11.5
NFIC-206ENST00000589123 HNRNPMP52272 730 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■■■■□ 25.2
NFIC-206ENST00000589123 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.093e-7■□□□□ 8.5
NFIC-206ENST00000589123 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.283e-7■■□□□ 12.9
NFIC-206ENST00000589123 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■■■■■ 29.2
NFIC-206ENST00000589123 AARSP49588 968 aaKnown RBP eCLIP14.99□□□□□ -0.013e-7■■■■□ 20.1
NFIC-206ENST00000589123 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.454e-7■■■■□ 22.7
NFIC-206ENST00000589123 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.025e-7■■■■■ 29.9
NFIC-206ENST00000589123 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.135e-7■■□□□ 12.1
NFIC-206ENST00000589123 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■■■■ 30.7
NFIC-206ENST00000589123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.396e-7■■■■■ 126.6
NFIC-206ENST00000589123 AGGF1Q8N302 714 aaeCLIP14.47□□□□□ -0.097e-7■■■□□ 18.8
NFIC-206ENST00000589123 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.257e-7■■■■□ 24.3
NFIC-206ENST00000589123 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.218e-7■■■■□ 24.7
NFIC-206ENST00000589123 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.189e-7■■■□□ 18.8
NFIC-206ENST00000589123 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.03■□□□□ -09e-7■■■■■ 27.5
NFIC-206ENST00000589123 PABPC4Q13310 644 aaKnown RBP eCLIP15.15■□□□□ 0.029e-7■■■■□ 24
NFIC-206ENST00000589123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■■ 27.3
NFIC-206ENST00000589123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■□□□ 13.9
NFIC-206ENST00000589123 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■■ 56.7
NFIC-206ENST00000589123 SND1Q7KZF4 910 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■□□□ 13.8
NFIC-206ENST00000589123 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■□□ 16.4
NFIC-206ENST00000589123 NKRFO15226 690 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■□□ 19.2
NFIC-206ENST00000589123 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■■■■ 28.6
NFIC-206ENST00000589123 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 20.2
NFIC-206ENST00000589123 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■■■ 30.3
NFIC-206ENST00000589123 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.75□□□□□ -0.051e-6■■■■■ 40.6
NFIC-206ENST00000589123 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.051e-6■■■■□ 25.9
NFIC-206ENST00000589123 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■■■ 40
NFIC-206ENST00000589123 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■■■ 29.6
NFIC-206ENST00000589123 NONOQ15233 471 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■□ 19.5
NFIC-206ENST00000589123 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.362e-6■■■□□ 15.7
NFIC-206ENST00000589123 SF3B1O75533 1304 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■■■■ 68.5
NFIC-206ENST00000589123 EFTUD2Q15029 972 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■■■■■ 41.9
NFIC-206ENST00000589123 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■□□□ 13.4
NFIC-206ENST00000589123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■□□ 18.9
NFIC-206ENST00000589123 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■□□ 15.4
NFIC-206ENST00000589123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■□ 26.4
NFIC-206ENST00000589123 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■□□□ 14.5
NFIC-206ENST00000589123 ILF3Q12906 894 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■□□ 15.2
NFIC-206ENST00000589123 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■□□ 19.2
NFIC-206ENST00000589123 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.04□□□□□ -0.162e-6■■■□□ 15.7
NFIC-206ENST00000589123 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■□□□ 13.6
NFIC-206ENST00000589123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■□□ 15
NFIC-206ENST00000589123 LARP4Q71RC2 724 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■■■□ 23.7
NFIC-206ENST00000589123 NIPBLQ6KC79 2804 aaeCLIP7.48□□□□□ -1.213e-6■■■□□ 16.4
NFIC-206ENST00000589123 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.113e-6■■□□□ 13.5
NFIC-206ENST00000589123 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.263e-6■■■■■ 28
NFIC-206ENST00000589123 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■■■□□ 16.9
NFIC-206ENST00000589123 GPKOWQ92917 476 aaPredicted RBP eCLIP14.94□□□□□ -0.024e-6■■■■■ 28.2
NFIC-206ENST00000589123 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.284e-6■■□□□ 11.8
NFIC-206ENST00000589123 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.81■□□□□ 0.124e-6■■■■■ 58.9
Retrieved 70 of 70 RNA–protein pairs in 10.6 ms